RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 SPON1Q9HCB6 807 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 FAM114A2Q9NRY5 505 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 SMARCAL1Q9NZC9 954 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 ADAM21Q9UKJ8 722 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 GTF3C4Q9UKN8 822 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 FAN1Q9Y2M0 1017 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 UTP11Q9Y3A2 253 aaKnown RBP14.39□□□□□ -0.11
LINC00563-201ENST00000566370 STYXL1Q9Y6J8 313 aa14.39□□□□□ -0.11
LINC00563-201ENST00000566370 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 GOLGA6L10A6NI86 522 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 NOP56O00567 594 aaKnown RBP14.38□□□□□ -0.11
LINC00563-201ENST00000566370 UBA1P22314 1058 aaKnown RBP14.38□□□□□ -0.11
LINC00563-201ENST00000566370 EDNRBP24530 442 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 PPIL2Q13356 520 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 BIRC3Q13489 604 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 IER5Q5VY09 327 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 DPY19L2Q6NUT2 758 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 SV2AQ7L0J3 742 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 MREGQ8N565 214 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 FAM76AQ8TAV0 307 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 ZNF653Q96CK0 615 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 MSTO1Q9BUK6 570 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.38□□□□□ -0.11
LINC00563-201ENST00000566370 RNF181Q9P0P0 153 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 NOCTQ9UK39 431 aaKnown RBP14.38□□□□□ -0.11
LINC00563-201ENST00000566370 MTUS1Q9ULD2 1270 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 FZD1Q9UP38 647 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 AGTPBP1Q9UPW5 1226 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 SIP14410 1827 aa14.38□□□□□ -0.11
LINC00563-201ENST00000566370 OTOFQ9HC10 1997 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 SPDYE5A6NIY4 337 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 IRF6O14896 467 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 CYP26A1O43174 497 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 PHACTR2O75167 634 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 SGPL1O95470 568 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 CYP11B1P15538 503 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 ARL2P36404 184 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 LMAN1P49257 510 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 SLC26A2P50443 739 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 RNASE9P60153 205 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 CNTN2Q02246 1040 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 PRPF4BQ13523 1007 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 TFDP1Q14186 410 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 MXD4Q14582 209 aaPredicted RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 TREML2Q5T2D2 321 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 LIN9Q5TKA1 542 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 ZPBP2Q6X784 338 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 GSPT2Q8IYD1 628 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 PLEKHO2Q8TD55 490 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 SLC20A1Q8WUM9 679 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 MAIP1Q8WWC4 291 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 PSPC1Q8WXF1 523 aaKnown RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 BBXQ8WY36 941 aaPredicted RBP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 MROH8Q9H579 483 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 ELP3Q9H9T3 547 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 OSGEPQ9NPF4 335 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC00563-201ENST00000566370 LCTP09848 1927 aa14.37□□□□□ -0.11
LINC00563-201ENST00000566370 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 FAM187AA6NFU0 413 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 RAD51CO43502 376 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 SPOPO43791 374 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 MAFO75444 373 aaPredicted RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 MYBL2P10244 700 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 GRM1Q13255 1194 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 ACAD10Q6JQN1 1059 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 SLC39A4Q6P5W5 647 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 USP50Q70EL3 339 aaPredicted RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 NOP9Q86U38 636 aaKnown RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 ZNF564Q8TBZ8 553 aaPredicted RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 TAS1R2Q8TE23 839 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 HDAC7Q8WUI4 952 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 GLG1Q92896 1179 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 TMEM143Q96AN5 459 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 RNPC3Q96LT9 517 aaKnown RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 KREMEN1Q96MU8 473 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 CGRRF1Q99675 332 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 MRPL4Q9BYD3 311 aaKnown RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 ASCC2Q9H1I8 757 aaPredicted RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 FAM204AQ9H8W3 233 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 ZCCHC17Q9NP64 241 aaKnown RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 RBAKQ9NYW8 714 aaPredicted RBP14.36□□□□□ -0.11
LINC00563-201ENST00000566370 CALCOCO1Q9P1Z2 691 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 BTBD7Q9P203 1132 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 LCMT1Q9UIC8 334 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 NFU1Q9UMS0 254 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 PCDHB2Q9Y5E7 798 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 SBF1O95248 1867 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
LINC00563-201ENST00000566370 ADGRA3Q8IWK6 1321 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms