RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HSP90AA2PQ14568 343 aaPredicted RBP22.22■■□□□ 1.15
CLN6-207ENST00000566347 IL17AQ16552 155 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 C15orf39Q6ZRI6 1047 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 ZDHHC14Q8IZN3 488 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 PLCD3Q8N3E9 789 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 CMASQ8NFW8 434 aaPredicted RBP22.22■■□□□ 1.15
CLN6-207ENST00000566347 MAN1C1Q9NR34 630 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 PHLPP2Q6ZVD8 1323 aa22.22■■□□□ 1.15
CLN6-207ENST00000566347 PP2D1A8MPX8 630 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 E9PMD0 336 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 K7ERI5 159 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 ATP2C1P98194 919 aaPredicted RBP22.21■■□□□ 1.15
CLN6-207ENST00000566347 ATF7IP2Q5U623 682 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 CCDC149Q6ZUS6 474 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 SUGP1Q8IWZ8 645 aaKnown RBP22.21■■□□□ 1.15
CLN6-207ENST00000566347 UBALD2Q8IYN6 164 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 KCTD17Q8N5Z5 321 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 DRC1Q96MC2 740 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 GPR62Q9BZJ7 368 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 POLD4Q9HCU8 107 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 SORCS3Q9UPU3 1222 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 SF3B1O75533 1304 aaKnown RBP eCLIP22.21■■□□□ 1.158e-9■■■■■ 155.1
CLN6-207ENST00000566347 DENND4AQ7Z401 1863 aa22.21■■□□□ 1.15
CLN6-207ENST00000566347 CCDC169A6NNP5 214 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 PTGESO14684 152 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 CD2BP2O95400 341 aaKnown RBP22.2■■□□□ 1.14
CLN6-207ENST00000566347 EDN1P05305 212 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 DMP1Q13316 513 aaPredicted RBP22.2■■□□□ 1.14
CLN6-207ENST00000566347 MTMR3Q13615 1198 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 NT5DC1Q5TFE4 455 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 EEF1DP3Q658K8 133 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 CYP26C1Q6V0L0 522 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 KREMEN2Q8NCW0 462 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 HDAC7Q8WUI4 952 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 ACSF2Q96CM8 615 aaPredicted RBP22.2■■□□□ 1.14
CLN6-207ENST00000566347 MMTAG2Q9BU76 263 aaKnown RBP22.2■■□□□ 1.14
CLN6-207ENST00000566347 TIPINQ9BVW5 301 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 RHOBTB2Q9BYZ6 727 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 C17orf75Q9HAS0 396 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 FNIP2Q9P278 1114 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 SMC3Q9UQE7 1217 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 USP20Q9Y2K6 914 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 PLXNA3P51805 1871 aa22.2■■□□□ 1.14
CLN6-207ENST00000566347 MYO10Q9HD67 2058 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 CASTOR2A6NHX0 329 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 HIP1RO75146 1068 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 CDC25AP30304 524 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 NPTX2P47972 431 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 PEX3P56589 373 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 RINT1Q6NUQ1 792 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 OTOP3Q7RTS5 596 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 FBXL6Q8N531 539 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 RIN2Q8WYP3 895 aaPredicted RBP22.19■■□□□ 1.14
CLN6-207ENST00000566347 RABGGTAQ92696 567 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 ASIC4Q96FT7 647 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 NT5C3AQ9H0P0 336 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 TMEM134Q9H6X4 195 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 TNFSF13BQ9Y275 285 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 GDAQ9Y2T3 454 aa22.19■■□□□ 1.14
CLN6-207ENST00000566347 RBM19Q9Y4C8 960 aaKnown RBP22.19■■□□□ 1.14
CLN6-207ENST00000566347 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.19■■□□□ 1.14
CLN6-207ENST00000566347 ZDBF2Q9HCK1 2354 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 C2orf16Q68DN1 1984 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 ELAVL2Q12926 359 aaKnown RBP22.18■■□□□ 1.14
CLN6-207ENST00000566347 HYIQ5T013 277 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 ARL6IP4Q66PJ3 421 aaKnown RBP22.18■■□□□ 1.14
CLN6-207ENST00000566347 C1orf186Q6ZWK4 172 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 DAW1Q8N136 415 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 B3GALT6Q96L58 329 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 TBC1D32Q96NH3 1257 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 PAAF1Q9BRP4 392 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 RUSC1Q9BVN2 902 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 PLEKHA4Q9H4M7 779 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 ARHGAP28Q9P2N2 729 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 KCNG1Q9UIX4 513 aa22.18■■□□□ 1.14
CLN6-207ENST00000566347 GUCY2CP25092 1073 aa22.17■■□□□ 1.14
CLN6-207ENST00000566347 HOXD11P31277 338 aaPredicted RBP22.17■■□□□ 1.14
CLN6-207ENST00000566347 ZRSR1Q15695 479 aaKnown RBP22.17■■□□□ 1.14
CLN6-207ENST00000566347 NAB2Q15742 525 aa22.17■■□□□ 1.14
CLN6-207ENST00000566347 MRPL4Q9BYD3 311 aaKnown RBP22.17■■□□□ 1.14
CLN6-207ENST00000566347 KMT5AQ9NQR1 393 aa22.17■■□□□ 1.14
CLN6-207ENST00000566347 CACNG4Q9UBN1 327 aa22.17■■□□□ 1.14
CLN6-207ENST00000566347 LIMD1Q9UGP4 676 aa22.17■■□□□ 1.14
CLN6-207ENST00000566347 MTCL1Q9Y4B5 1905 aaKnown RBP22.17■■□□□ 1.14
CLN6-207ENST00000566347 WDFY4Q6ZS81 3184 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 CCDC195A0A1B0GUA6 201 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 VWA3AA6NCI4 1184 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 KIF4AO95239 1232 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 KCNK18Q7Z418 384 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 PALB2Q86YC2 1186 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 FEZF2Q8TBJ5 459 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 HASPINQ8TF76 798 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 CDK5RAP3Q96JB5 506 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 ACO2Q99798 780 aaKnown RBP22.16■■□□□ 1.14
CLN6-207ENST00000566347 PRRX2Q99811 253 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 TTPALQ9BTX7 342 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 PIEZO1Q92508 2521 aa22.16■■□□□ 1.14
CLN6-207ENST00000566347 TGM5O43548 720 aa22.15■■□□□ 1.14
CLN6-207ENST00000566347 PAPLNO95428 1278 aa22.15■■□□□ 1.14
CLN6-207ENST00000566347 BRD1O95696 1058 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms