RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 IFT74Q96LB3 600 aa20.21■□□□□ 0.83
USB1-213ENST00000566292 LAD1O00515 517 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 ST18O60284 1047 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 ASGR2P07307 311 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 PRPHP41219 470 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 NAB2Q15742 525 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 NT5DC1Q5TFE4 455 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 FBXL6Q8N531 539 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 MMTAG2Q9BU76 263 aaKnown RBP20.2■□□□□ 0.82
USB1-213ENST00000566292 RAB34Q9BZG1 259 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 SMOC2Q9H3U7 446 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 SORCS3Q9UPU3 1222 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 USTQ9Y2C2 406 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 STK24Q9Y6E0 443 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 PIEZO1Q92508 2521 aa20.2■□□□□ 0.82
USB1-213ENST00000566292 BRD1O95696 1058 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 GLUD1P00367 558 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 MYBP10242 640 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 EFNA5P52803 228 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 NHLH1Q02575 133 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 TUSC3Q13454 348 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 HSP90AA2PQ14568 343 aaPredicted RBP20.19■□□□□ 0.82
USB1-213ENST00000566292 USP41Q3LFD5 358 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 IER5LQ5T953 404 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 C15orf39Q6ZRI6 1047 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 DAW1Q8N136 415 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 CMASQ8NFW8 434 aaPredicted RBP20.19■□□□□ 0.82
USB1-213ENST00000566292 ADPGKQ9BRR6 497 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 LIMD1Q9UGP4 676 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
USB1-213ENST00000566292 DOCK8Q8NF50 2099 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 CASTOR2A6NHX0 329 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 TADA2AO75478 443 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 PDGFBP01127 241 aaPredicted RBP20.18■□□□□ 0.82
USB1-213ENST00000566292 THP07101 528 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 GJB2P29033 226 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 MTMR3Q13615 1198 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 KRT79Q5XKE5 535 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 DTHD1Q6ZMT9 781 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 CCDC149Q6ZUS6 474 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 SUGP1Q8IWZ8 645 aaKnown RBP20.18■□□□□ 0.82
USB1-213ENST00000566292 GPR65Q8IYL9 337 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 PLCD3Q8N3E9 789 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 HASPINQ8TF76 798 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
USB1-213ENST00000566292 RUSC1Q9BVN2 902 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 DNM3Q9UQ16 869 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 DOCK6Q96HP0 2047 aa20.18■□□□□ 0.82
USB1-213ENST00000566292 CITO14578 2027 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 CCDC195A0A1B0GUA6 201 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 RFPL2O75678 378 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 KIF4AO95239 1232 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 SPATA31D3P0C874 917 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 RPL17P18621 184 aaKnown RBP20.17■□□□□ 0.82
USB1-213ENST00000566292 VCPP55072 806 aaKnown RBP20.17■□□□□ 0.82
USB1-213ENST00000566292 PEX3P56589 373 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 MAPK7Q13164 816 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 DCAF4L1Q3SXM0 396 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 RILPL1Q5EBL4 403 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 RTP2Q5QGT7 225 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 ATF7IP2Q5U623 682 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 SPATA31D4Q6ZUB0 917 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 PALB2Q86YC2 1186 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 GLYCTKQ8IVS8 523 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 UBALD2Q8IYN6 164 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 PRSS33Q8NF86 280 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.17■□□□□ 0.82
USB1-213ENST00000566292 FNIP2Q9P278 1114 aa20.17■□□□□ 0.82
USB1-213ENST00000566292 K7ERI5 159 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 TGM5O43548 720 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 HIP1RO75146 1068 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 NPTX2P47972 431 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 ATP2C1P98194 919 aaPredicted RBP20.16■□□□□ 0.82
USB1-213ENST00000566292 RINT1Q6NUQ1 792 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 LILRA6Q6PI73 481 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 PRSS55Q6UWB4 352 aaPredicted RBP20.16■□□□□ 0.82
USB1-213ENST00000566292 C1orf186Q6ZWK4 172 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 TAS1R3Q7RTX0 852 aa20.16■□□□□ 0.82
USB1-213ENST00000566292 SF3B1O75533 1304 aaKnown RBP eCLIP20.16■□□□□ 0.82
USB1-213ENST00000566292 CCDC169A6NNP5 214 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 N4BP1O75113 896 aaKnown RBP20.15■□□□□ 0.82
USB1-213ENST00000566292 PAPLNO95428 1278 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 C1RP00736 705 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 OTOP3Q7RTS5 596 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 HDAC7Q8WUI4 952 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 ZNF707Q96C28 371 aaPredicted RBP20.15■□□□□ 0.82
USB1-213ENST00000566292 ACSF2Q96CM8 615 aaPredicted RBP20.15■□□□□ 0.82
USB1-213ENST00000566292 PNMA5Q96PV4 448 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 ACO2Q99798 780 aaKnown RBP20.15■□□□□ 0.82
USB1-213ENST00000566292 RHOBTB2Q9BYZ6 727 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 ARHGAP28Q9P2N2 729 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 TNFSF13BQ9Y275 285 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 PHLPP2Q6ZVD8 1323 aa20.15■□□□□ 0.82
USB1-213ENST00000566292 PDCD11Q14690 1871 aaKnown RBP20.15■□□□□ 0.82
USB1-213ENST00000566292 IGFBP6P24592 240 aaPredicted RBP20.14■□□□□ 0.81
USB1-213ENST00000566292 DMP1Q13316 513 aaPredicted RBP20.14■□□□□ 0.81
USB1-213ENST00000566292 GLRA4Q5JXX5 417 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms