RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 GTPBP4Q9BZE4 634 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 LUC7LQ9NQ29 371 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ANKRD36BQ8N2N9 1353 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 LY75O60449 1722 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ADCY6O43306 1168 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 SNUPNO95149 360 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 CT47B1P0C2W7 299 aaPredicted RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 EDNRBP24530 442 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 TBX4P57082 545 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ROM1Q03395 351 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 CD69Q07108 199 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ZNF124Q15973 351 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 TTLL7Q6ZT98 887 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 LARP4Q71RC2 724 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 KTN1Q86UP2 1357 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ZDHHC14Q8IZN3 488 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 OR5AN1Q8NGI8 311 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 TTC8Q8TAM2 541 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 CPA5Q8WXQ8 436 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 NOL10Q9BSC4 688 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 ROCK2O75116 1388 aaKnown RBP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 TRIM75PA6NK02 468 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 DDX3XO00571 662 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC00561-201ENST00000565815 IL33O95760 270 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 GALEQ14376 348 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 LMBR1LQ6UX01 489 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 PWWP2AQ96N64 755 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 CHST12Q9NRB3 414 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 NUB1Q9Y5A7 615 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 GPR45Q9Y5Y3 372 aa5.25□□□□□ -1.57
LINC00561-201ENST00000565815 PXDNLA1KZ92 1463 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 TEX51A0A1B0GUA7 166 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 A6NNZ2 444 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 TMEM127O75204 238 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 C1QTNF9P0C862 333 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 KIF23Q02241 960 aaPredicted RBP5.24□□□□□ -1.57
LINC00561-201ENST00000565815 UAP1L1Q3KQV9 507 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 VWA3BQ502W6 1294 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 SYDE1Q6ZW31 735 aaPredicted RBP5.24□□□□□ -1.57
LINC00561-201ENST00000565815 ZZZ3Q8IYH5 903 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 EVC2Q86UK5 1308 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 KNG1P01042 644 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 MLC1Q15049 377 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 TBR1Q16650 682 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 MUM1Q2TAK8 710 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 MCTP2Q6DN12 878 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 ABHD15Q6UXT9 468 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 MSL3Q8N5Y2 521 aaKnown RBP5.24□□□□□ -1.57
LINC00561-201ENST00000565815 GLB1L3Q8NCI6 653 aaPredicted RBP5.24□□□□□ -1.57
LINC00561-201ENST00000565815 DENND2AQ9ULE3 1009 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 DNM3Q9UQ16 869 aa5.24□□□□□ -1.57
LINC00561-201ENST00000565815 SMG6Q86US8 1419 aaKnown RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 NSD2O96028 1365 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 TTC21BQ7Z4L5 1316 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 ADAMTS20P59510 1910 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 KLHL18O94889 574 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 CFBP00751 764 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 HSPA5P11021 654 aaKnown RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 PPP3CAQ08209 521 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 ADAM15Q13444 863 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 ATG14Q6ZNE5 492 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 HSPBAP1Q96EW2 488 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 SLC13A1Q9BZW2 595 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 ZNF277Q9NRM2 450 aaPredicted RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 USP36Q9P275 1121 aaKnown RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 CCNL1Q9UK58 526 aaPredicted RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 INTUQ9ULD6 942 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 PCDHB6Q9Y5E3 794 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 PMF1-BGLAPU3KQ54 211 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 TNRC6CQ9HCJ0 1690 aaKnown RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 USP47Q96K76 1375 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 IGSF1Q8N6C5 1336 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 CENPJQ9HC77 1338 aaPredicted RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 ST20-MTHFSA0A0A6YYL1 179 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 LRRC14BA6NHZ5 514 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 MAP4K4O95819 1239 aaPredicted RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 MGAT5Q09328 741 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 TMEM62Q0P6H9 643 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 IL10RAQ13651 578 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 WDR72Q3MJ13 1102 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 XP32Q5T750 250 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 FAM102BQ5T8I3 360 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 TRMT10BQ6PF06 316 aaKnown RBP5.23□□□□□ -1.57
LINC00561-201ENST00000565815 MAGEB6Q8N7X4 407 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 KYQ8NBH2 561 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 PPP1R35Q8TAP8 253 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 KAT5Q92993 513 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 RNF38Q9H0F5 515 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 CDY2AQ9Y6F7 541 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 NFAT5O94916 1531 aa5.23□□□□□ -1.57
LINC00561-201ENST00000565815 FFAR3O14843 346 aa5.22□□□□□ -1.57
LINC00561-201ENST00000565815 APEX1P27695 318 aaKnown RBP5.22□□□□□ -1.57
LINC00561-201ENST00000565815 RECQLP46063 649 aaPredicted RBP5.22□□□□□ -1.57
LINC00561-201ENST00000565815 OGFOD2Q6N063 350 aa5.22□□□□□ -1.57
LINC00561-201ENST00000565815 LINC00482Q8N8I6 264 aa5.22□□□□□ -1.57
LINC00561-201ENST00000565815 BTBD2Q9BX70 525 aa5.22□□□□□ -1.57
LINC00561-201ENST00000565815 PRKRIP1Q9H875 184 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms