RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 MYH15Q9Y2K3 1946 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 EVPLQ92817 2033 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 TAF4O00268 1085 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 ECI2O75521 394 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 FOSP01100 380 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF806P0C7X5 589 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 NTHL1P78549 312 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 SATB1Q01826 763 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
CAPN3-215ENST00000565559 LILRA6Q6PI73 481 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 NIPA1Q7RTP0 329 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 CATSPER4Q7RTX7 472 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
CAPN3-215ENST00000565559 GPR65Q8IYL9 337 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 RNF168Q8IYW5 571 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-215ENST00000565559 MAP3K14Q99558 947 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 ARRDC1-AS1Q9H2J1 176 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 LMAN1LQ9HAT1 526 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 SENP2Q9HC62 589 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 GABBR1Q9UBS5 961 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 SAMM50Q9Y512 469 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 PCDHA10Q9Y5I2 948 aa12.5□□□□□ -0.41
CAPN3-215ENST00000565559 IPO5O00410 1097 aaKnown RBP12.49□□□□□ -0.41
CAPN3-215ENST00000565559 AXIN1O15169 862 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 SGSM2O43147 1006 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 DDAH1O94760 285 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 DNM2P50570 870 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF252P-AS1Q0IIN9 211 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 USP41Q3LFD5 358 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 RNF43Q68DV7 783 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF746Q6NUN9 644 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-215ENST00000565559 HEATR3Q7Z4Q2 680 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 TEX2Q8IWB9 1127 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 ITFG1Q8TB96 612 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 FAM3CQ92520 227 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 COLEC11Q9BWP8 271 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 CHST7Q9NS84 486 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 RXFP3Q9NSD7 469 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 TBC1D22BQ9NU19 505 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 DAXXQ9UER7 740 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-215ENST00000565559 KCNH3Q9ULD8 1083 aa12.49□□□□□ -0.41
CAPN3-215ENST00000565559 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
CAPN3-215ENST00000565559 A0A087WZ62 844 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 C8AP07357 584 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 HOXA9P31269 272 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 PABPC1LQ4VXU2 614 aaKnown RBP12.48□□□□□ -0.41
CAPN3-215ENST00000565559 HEATR6Q6AI08 1181 aaKnown RBP12.48□□□□□ -0.41
CAPN3-215ENST00000565559 AGMOQ6ZNB7 445 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF410Q86VK4 478 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 PLA2G4DQ86XP0 818 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 NPAS3Q8IXF0 933 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 COLGALT2Q8IYK4 626 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 SPEM1Q8N4L4 309 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 MBOAT7Q96N66 472 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 FDXACB1Q9BRP7 624 aaPredicted RBP12.48□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 ANO3Q9BYT9 981 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 IL25Q9H293 177 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 BRD9Q9H8M2 597 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 GDE1Q9NZC3 331 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 FBXW11Q9UKB1 542 aa12.48□□□□□ -0.41
CAPN3-215ENST00000565559 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 CCL16O15467 120 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 DHX15O43143 795 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 CDC45O75419 566 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 EFEMP2O95967 443 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 RPL17P18621 184 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 SPINK2P20155 84 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 LRRC32Q14392 662 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 CCDC6Q16204 474 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 MRPL10Q7Z7H8 261 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 GATA6Q92908 595 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 IRF7Q92985 503 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 PGBD1Q96JS3 809 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 B3GALT6Q96L58 329 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 ESYT1Q9BSJ8 1104 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 ANKFY1Q9P2R3 1169 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 MRPS23Q9Y3D9 190 aaKnown RBP12.47□□□□□ -0.41
CAPN3-215ENST00000565559 MAST4O15021 2626 aa12.47□□□□□ -0.41
CAPN3-215ENST00000565559 SHISA7A6NL88 538 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 EIF4E1BA6NMX2 242 aaKnown RBP12.46□□□□□ -0.41
CAPN3-215ENST00000565559 DDX11L8A8MPP1 907 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 EPN2O95208 641 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 PAPSS2O95340 614 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-215ENST00000565559 PLEKHA8P1O95397 391 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 ZIC2O95409 532 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-215ENST00000565559 SREBF1P36956 1147 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 PRKCEQ02156 737 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 AP3B2Q13367 1082 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 DAB2IPQ5VWQ8 1189 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 FUT10Q6P4F1 479 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 ZNF654Q8IZM8 581 aa12.46□□□□□ -0.41
CAPN3-215ENST00000565559 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
CAPN3-215ENST00000565559 CNNM3Q8NE01 707 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms