RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 CDCA3Q99618 268 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-212ENST00000565517 TCF25Q9BQ70 676 aa16.91■□□□□ 0.3
COMMD4-212ENST00000565517 PYM1Q9BRP8 204 aaKnown RBP16.91■□□□□ 0.3
COMMD4-212ENST00000565517 TCHPQ9BT92 498 aa16.91■□□□□ 0.3
COMMD4-212ENST00000565517 CCDC94Q9BW85 323 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-212ENST00000565517 KBTBD4Q9NVX7 518 aa16.91■□□□□ 0.3
COMMD4-212ENST00000565517 FAM13BQ9NYF5 915 aa16.91■□□□□ 0.3
COMMD4-212ENST00000565517 FRMD3A2A2Y4 597 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 PTGESO14684 152 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 CLDN3O15551 220 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 THP07101 528 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 NUCB2P80303 420 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 AMPD3Q01432 767 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 TFF2Q03403 129 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 MCL1Q07820 350 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 ZNF720Q7Z2F6 126 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 TMC7Q7Z402 723 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 EFHBQ8N7U6 833 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 MRPL43Q8N983 215 aaKnown RBP16.9■□□□□ 0.3
COMMD4-212ENST00000565517 LEO1Q8WVC0 666 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-212ENST00000565517 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 COLEC11Q9BWP8 271 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 SCAND2PQ9GZW5 306 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-212ENST00000565517 TLE6Q9H808 572 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 MAGEF1Q9HAY2 307 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 TOPORSQ9NS56 1045 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-212ENST00000565517 GDAQ9Y2T3 454 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 IRAK3Q9Y616 596 aa16.9■□□□□ 0.3
COMMD4-212ENST00000565517 SPTBN5Q9NRC6 3674 aaKnown RBP16.9■□□□□ 0.3
COMMD4-212ENST00000565517 PDCD11Q14690 1871 aaKnown RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 XIRP2A4UGR9 3374 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 CSPG5O95196 566 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 OR1G1P47890 313 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 YARSP54577 528 aaKnown RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ADAM15Q13444 863 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 TUSC3Q13454 348 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 SMC1AQ14683 1233 aaKnown RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 NOLC1Q14978 699 aaKnown RBP eCLIP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 LEXMQ3ZCV2 418 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 XKR4Q5GH76 650 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 CNNM4Q6P4Q7 775 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ALKAL1Q6UXT8 129 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ZBTB33Q86T24 672 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 SFR1Q86XK3 245 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 VPS52Q8N1B4 723 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 BCL7CQ8WUZ0 217 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ZBTB45Q96K62 511 aaPredicted RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ACAP3Q96P50 834 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 ZBP1Q9H171 429 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 OLFML3Q9NRN5 406 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 CLDND1Q9NY35 253 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 TCF20Q9UGU0 1960 aaKnown RBP16.89■□□□□ 0.29
COMMD4-212ENST00000565517 A0A0C4DFX4 3053 aa16.89■□□□□ 0.29
COMMD4-212ENST00000565517 POLR2DO15514 142 aaKnown RBP16.88■□□□□ 0.29
COMMD4-212ENST00000565517 EFEMP2O95967 443 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 CTSAP10619 480 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 LTBRP36941 435 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 NRIP1P48552 1158 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 LIG4P49917 911 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 NAB2Q15742 525 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 KYAT1Q16773 422 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 DUSP6Q16828 381 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 PLPP4Q5VZY2 271 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 CEP120Q8N960 986 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 DHX58Q96C10 678 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 BICD1Q96G01 975 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 STRA6Q9BX79 667 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 IGFLR1Q9H665 355 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 ANKFY1Q9P2R3 1169 aa16.88■□□□□ 0.29
COMMD4-212ENST00000565517 C2orf71A6NGG8 1288 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 HIDE1A8MVS5 230 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 HNRNPDLO14979 420 aaKnown RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 PPP1R37O75864 691 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 CXCL14O95715 111 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 BMP1P13497 986 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 IDEP14735 1019 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 KCNA5P22460 613 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 CMA1P23946 247 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.294e-9■■■■■ 28.7
COMMD4-212ENST00000565517 PUS10Q3MIT2 529 aaKnown RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 HERC4Q5GLZ8 1057 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 RBM23Q86U06 439 aaKnown RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 CCDC65Q8IXS2 484 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 RNF168Q8IYW5 571 aaPredicted RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 PPP1R10Q96QC0 940 aaKnown RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 C7orf25Q9BPX7 421 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 VN1R3Q9BXE9 311 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 TRIM9Q9C026 710 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
COMMD4-212ENST00000565517 PANK4Q9NVE7 773 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 KCNH3Q9ULD8 1083 aa16.87■□□□□ 0.29
COMMD4-212ENST00000565517 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms