RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 DENND4AQ7Z401 1863 aa21.9■■□□□ 1.1
CLN6-206ENST00000565471 PHLPP2Q6ZVD8 1323 aa21.89■■□□□ 1.1
CLN6-206ENST00000565471 SPDYE4A6NLX3 237 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 PTGESO14684 152 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 HSP90AA2PQ14568 343 aaPredicted RBP21.89■■□□□ 1.09
CLN6-206ENST00000565471 USP41Q3LFD5 358 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 HYIQ5T013 277 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 C15orf39Q6ZRI6 1047 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 APBB1IPQ7Z5R6 666 aaPredicted RBP21.89■■□□□ 1.09
CLN6-206ENST00000565471 DRC1Q96MC2 740 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 USP20Q9Y2K6 914 aa21.89■■□□□ 1.09
CLN6-206ENST00000565471 K7ERI5 159 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 HIP1RO75146 1068 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 GLUD1P00367 558 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 THP07101 528 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 CDC25AP30304 524 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 NPTX2P47972 431 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 CREMQ03060 361 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 NT5DC1Q5TFE4 455 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 ATF7IP2Q5U623 682 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 ARL6IP4Q66PJ3 421 aaKnown RBP21.88■■□□□ 1.09
CLN6-206ENST00000565471 RINT1Q6NUQ1 792 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 C1orf186Q6ZWK4 172 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 ZDHHC14Q8IZN3 488 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 DAW1Q8N136 415 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 PLCD3Q8N3E9 789 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 TDRD5Q8NAT2 981 aaKnown RBP21.88■■□□□ 1.09
CLN6-206ENST00000565471 PBXIP1Q96AQ6 731 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 RUSC1Q9BVN2 902 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 TIPINQ9BVW5 301 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 RHOBTB2Q9BYZ6 727 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 TMEM134Q9H6X4 195 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 C17orf75Q9HAS0 396 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 MAN1C1Q9NR34 630 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 FNIP2Q9P278 1114 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 SMC3Q9UQE7 1217 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 TNFSF13BQ9Y275 285 aa21.88■■□□□ 1.09
CLN6-206ENST00000565471 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.88■■□□□ 1.09
CLN6-206ENST00000565471 SF3B1O75533 1304 aaKnown RBP eCLIP21.87■■□□□ 1.096e-9■■■■■ 118.2
CLN6-206ENST00000565471 TADA2AO75478 443 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 PEX3P56589 373 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 MAPK7Q13164 816 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 DMP1Q13316 513 aaPredicted RBP21.87■■□□□ 1.09
CLN6-206ENST00000565471 NAB2Q15742 525 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 CYP26C1Q6V0L0 522 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 KCNK18Q7Z418 384 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 ZBTB33Q86T24 672 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 HDAC7Q8WUI4 952 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 PAAF1Q9BRP4 392 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 NT5C3AQ9H0P0 336 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 ARHGAP28Q9P2N2 729 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 SORCS3Q9UPU3 1222 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 PLXNA3P51805 1871 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 ZNF318Q5VUA4 2279 aa21.87■■□□□ 1.09
CLN6-206ENST00000565471 CASTOR2A6NHX0 329 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 CCDC169A6NNP5 214 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 GUCY2CP25092 1073 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 CCDC149Q6ZUS6 474 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 UBALD2Q8IYN6 164 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 KREMEN2Q8NCW0 462 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 FEZF2Q8TBJ5 459 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 RABGGTAQ92696 567 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 ASIC4Q96FT7 647 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 B3GALT6Q96L58 329 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 CACNG4Q9UBN1 327 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 GDAQ9Y2T3 454 aa21.86■■□□□ 1.09
CLN6-206ENST00000565471 RBM19Q9Y4C8 960 aaKnown RBP21.86■■□□□ 1.09
CLN6-206ENST00000565471 VWA3AA6NCI4 1184 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 PAPLNO95428 1278 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 ELAVL2Q12926 359 aaKnown RBP21.85■■□□□ 1.09
CLN6-206ENST00000565471 MTMR3Q13615 1198 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 RIN2Q8WYP3 895 aaPredicted RBP21.85■■□□□ 1.09
CLN6-206ENST00000565471 PNMA5Q96PV4 448 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 MRPL4Q9BYD3 311 aaKnown RBP21.85■■□□□ 1.09
CLN6-206ENST00000565471 CXCL16Q9H2A7 254 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 PLEKHA4Q9H4M7 779 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 KMT5AQ9NQR1 393 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 KCNG1Q9UIX4 513 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 C2orf16Q68DN1 1984 aa21.85■■□□□ 1.09
CLN6-206ENST00000565471 SLC26A4O43511 780 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 KIF4AO95239 1232 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 LARP1BQ659C4 914 aaKnown RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 OTOP3Q7RTS5 596 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 TAS1R3Q7RTX0 852 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 SUGP1Q8IWZ8 645 aaKnown RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 FBXL6Q8N531 539 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 SYT2Q8N9I0 419 aaPredicted RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 ACSF2Q96CM8 615 aaPredicted RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 ACO2Q99798 780 aaKnown RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 NTPCRQ9BSD7 190 aaKnown RBP21.84■■□□□ 1.09
CLN6-206ENST00000565471 PTPRHQ9HD43 1115 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 KCND2Q9NZV8 630 aa21.84■■□□□ 1.09
CLN6-206ENST00000565471 TRIOO75962 3097 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 GRM5P41594 1212 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 ZRSR1Q15695 479 aaKnown RBP21.83■■□□□ 1.09
CLN6-206ENST00000565471 RTP2Q5QGT7 225 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 LILRA6Q6PI73 481 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 HASPINQ8TF76 798 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 SPIRE2Q8WWL2 714 aa21.83■■□□□ 1.09
CLN6-206ENST00000565471 CDK5RAP3Q96JB5 506 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms