RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 PFKFB1P16118 471 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 PDE6AP16499 860 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 RXRBP28702 533 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 TCF7P36402 384 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SYKP43405 635 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 PIP4K2AP48426 406 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SEPHS1P49903 392 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 CCT8P50990 548 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 LIMK1P53667 647 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 MRPS35P82673 323 aaKnown RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 MYL5Q02045 173 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 TBX2Q13207 712 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ELOAQ14241 798 aaKnown RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SWI5Q1ZZU3 235 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 CAVIN4Q5BKX8 364 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 KAZNQ674X7 775 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 KRT40Q6A162 431 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 FDX2Q6P4F2 183 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 TRIM65Q6PJ69 517 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SHC4Q6S5L8 630 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 BTNL9Q6UXG8 535 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 LDHAL6AQ6ZMR3 332 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 DBX2Q6ZNG2 339 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SPATA21Q7Z572 469 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ZNF354CQ86Y25 554 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SPATA2LQ8IUW3 424 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SLC44A2Q8IWA5 706 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 FAM114A1Q8IWE2 563 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 REXO1L1PQ8IX06 675 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 FBXL6Q8N531 539 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ESX1Q8N693 406 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 MLKLQ8NB16 471 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 PIGBQ92521 554 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SLC35B4Q969S0 331 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ATP6V1E2Q96A05 226 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 FAM161BQ96MY7 647 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 RUSC1Q9BVN2 902 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 CARD6Q9BX69 1037 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 SLC13A1Q9BZW2 595 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 TSGA10Q9BZW7 698 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 KRT23Q9C075 422 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ATP6V0A4Q9HBG4 840 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 LY9Q9HBG7 655 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 PIH1D3Q9NQM4 214 aaKnown RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 AASDHPPTQ9NRN7 309 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 TMOD3Q9NYL9 352 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 IL20Q9NYY1 176 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 HECAQ9UBI9 543 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 HOOK1Q9UJC3 728 aaKnown RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 EPN1Q9Y6I3 576 aaPredicted RBP5.6□□□□□ -1.51
CAPN3-214ENST00000565274 ECM29Q5VYK3 1845 aa5.6□□□□□ -1.51
CAPN3-214ENST00000565274 COL22A1Q8NFW1 1626 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 MROH7-TTC4A0A0A0MT08 1334 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 AKAP11Q9UKA4 1901 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 A0A087WWV3 80 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 VWA3AA6NCI4 1184 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 LACTBL1A8MY62 500 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 C9IYK1 514 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 H3BRJ5 948 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 K7ENM7 598 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 IRS4O14654 1257 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ZBTB43O43298 467 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 PRPF3O43395 683 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 KDM1AO60341 852 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TRPA1O75762 1119 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RASGRP1O95267 797 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 BMP15O95972 392 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 PECAM1P16284 738 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ZNF18P17022 549 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TYRP1P17643 537 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 YY1P25490 414 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 GALNSP34059 522 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 HSD17B2P37059 387 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 IARSP41252 1262 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RAD52P43351 418 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 MAGEA10P43363 369 aaPredicted RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 METAP2P50579 478 aaKnown RBP eCLIP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RAB27AP51159 221 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TUBB4BP68371 445 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 CEBPZQ03701 1054 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 PPP2R3AQ06190 1150 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 MAP3K12Q12852 859 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 GRM1Q13255 1194 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 SART3Q15020 963 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 VWA3BQ502W6 1294 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 METTL24Q5JXM2 366 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 ANKRD34AQ69YU3 496 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 CAPRIN2Q6IMN6 1127 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 FAM196AQ6ZSG2 479 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 SEPT14Q6ZU15 432 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 INTS8Q75QN2 995 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 CYB5R4Q7L1T6 521 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RSRC2Q7L4I2 434 aaKnown RBP5.59□□□□□ -1.51
CAPN3-214ENST00000565274 RSPH3Q86UC2 560 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 VPS37DQ86XT2 251 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 HOMER1Q86YM7 354 aa5.59□□□□□ -1.51
CAPN3-214ENST00000565274 TBC1D10CQ8IV04 446 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms