RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	COPB1	P53618	953 aa	Known RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CLDN10	P78369	228 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	BFSP1	Q12934	665 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	PSMD6	Q15008	389 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	PLEKHG4	Q58EX7	1191 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	MIIP	Q5JXC2	388 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZBTB41	Q5SVQ8	909 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	ZBTB33	Q86T24	672 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	USP37	Q86T82	979 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CDR2L	Q86X02	465 aa	Predicted RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	CEP120	Q8N960	986 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	TMC2	Q8TDI7	906 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	APBB2	Q92870	758 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	SLC35C1	Q96A29	364 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	FAM213A	Q9BRX8	229 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	TUBGCP2	Q9BSJ2	902 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	FTHL17	Q9BXU8	183 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	EIF2A	Q9BY44	585 aa	Known RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	IFIH1	Q9BYX4	1025 aa	Known RBP	10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	TMEM39A	Q9NV64	488 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	INTS13	Q9NVM9	706 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	TAB2	Q9NYJ8	693 aa		10.71	□□□□□ -0.69
SIN3A-205	ENST00000564778	SCN5A	Q14524	2016 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	PMM2	O15305	246 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	CBFA2T2	O43439	604 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	MGEA5	O60502	916 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZNF623	O75123	536 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	NPTXR	O95502	500 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	SERPINC1	P01008	464 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	STAG3L1	P0CL83	205 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	HARS	P12081	509 aa	Known RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	KRT13	P13646	458 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	TNFSF9	P41273	254 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	ACOT2	P49753	483 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	NFX1	Q12986	1120 aa	Known RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	ENOX2	Q16206	610 aa	Known RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	TWF2	Q6IBS0	349 aa	Known RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	C7orf61	Q8IZ16	206 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	PLEKHO2	Q8TD55	490 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	PARD3B	Q8TEW8	1205 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	MRFAP1L1	Q96HT8	127 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	PPP1R12C	Q9BZL4	782 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	RTN4	Q9NQC3	1192 aa	Known RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	FAM105A	Q9NUU6	356 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	RBAK	Q9NYW8	714 aa	Predicted RBP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	IFNK	Q9P0W0	207 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	LTBP2	Q14767	1821 aa		10.7	□□□□□ -0.7
SIN3A-205	ENST00000564778	MICAL3	Q7RTP6	2002 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	RANBP2	P49792	3224 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778		A0A0U1RQF3	1178 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIM43B	A6NCK2	446 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	MEFV	O15553	781 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	IL18RAP	O95256	599 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TIMP1	P01033	207 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	AFP	P02771	609 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TPM3	P06753	285 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TPM2	P07951	284 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	CXCL8	P10145	99 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZSCAN20	P17040	1043 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	GTF2H1	P32780	548 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	CYP2C18	P33260	490 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	VAMP7	P51809	220 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZNF75D	P51815	510 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	UBASH3A	P57075	661 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	NR1I3	Q14994	352 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	SURF1	Q15526	300 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	VWA3B	Q502W6	1294 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	C1orf220	Q5T0J3	134 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	MRPL10	Q7Z7H8	261 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	CD302	Q8IX05	232 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	THNSL1	Q8IYQ7	743 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	SMG8	Q8ND04	991 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	LINC01599	Q8WXQ3	324 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	SEPT8	Q92599	483 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	VWCE	Q96DN2	955 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	CCDC94	Q9BW85	323 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIM6	Q9C030	488 aa	Predicted RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	XPO4	Q9C0E2	1151 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	NDST4	Q9H3R1	872 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	NXF3	Q9H4D5	531 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	RPF1	Q9H9Y2	349 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	PLEKHA5	Q9HAU0	1116 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	C1orf112	Q9NSG2	853 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	IPP	Q9Y573	584 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	PCDHB2	Q9Y5E7	798 aa		10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778	PDCD11	Q14690	1871 aa	Known RBP	10.69	□□□□□ -0.7
SIN3A-205	ENST00000564778		A0A1W2PQC6	194 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TTC26	A0AVF1	554 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	GTPBP10	A4D1E9	387 aa	Known RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778		C9IYK1	514 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	P4HA2	O15460	535 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	STX10	O60499	249 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	N4BP1	O75113	896 aa	Known RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	RECQL4	O94761	1208 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIM49	P0CI25	452 aa		10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms