RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ZNF568Q3ZCX4 644 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 TAS1R3Q7RTX0 852 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 TMEM161BQ8NDZ6 487 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 ZHX3Q9H4I2 956 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 CLEC1BQ9P126 229 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 STK17AQ9UEE5 414 aa20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 BARX2Q9UMQ3 279 aaPredicted RBP20.14■□□□□ 0.81
SYNGR3-204ENST00000564642 SPTLC2O15270 562 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 MBTPS2O43462 519 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 TBCAO75347 108 aaKnown RBP20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 F13A1P00488 732 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 LLGL2Q6P1M3 1020 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 ZBTB33Q86T24 672 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 LINC00301Q8NCQ3 95 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 AUTS2Q8WXX7 1259 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 MSLNLQ96KJ4 702 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 CCDC94Q9BW85 323 aaPredicted RBP20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 PARVGQ9HBI0 331 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 XIRP2A4UGR9 3374 aa20.13■□□□□ 0.81
SYNGR3-204ENST00000564642 MAPTP10636 758 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 YARSP54577 528 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 NCKAP1LP55160 1127 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 RBM10P98175 930 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 COASYQ13057 564 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 TUSC3Q13454 348 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 SMAD4Q13485 552 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 FOXD4L6Q3SYB3 417 aaPredicted RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 MPZL3Q6UWV2 235 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 FOXD4L3Q6VB84 417 aaPredicted RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 TMEM184AQ6ZMB5 413 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 CCDC73Q6ZRK6 1079 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 HAUS6Q7Z4H7 955 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 VN1R3Q9BXE9 311 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 CDT1Q9H211 546 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 PTPRHQ9HD43 1115 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 MRPL17Q9NRX2 175 aaKnown RBP20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 MARCH5Q9NX47 278 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 SSX2IPQ9Y2D8 614 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 IRAK3Q9Y616 596 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 TRIP11Q15643 1979 aa20.12■□□□□ 0.81
SYNGR3-204ENST00000564642 TRAK2O60296 914 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 CLASP2O75122 1294 aaKnown RBP20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 PPP6R2O75170 966 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 YEATS4O95619 227 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 SOD2P04179 222 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 MCF2P10911 925 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 SCP2P22307 547 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 GRM5P41594 1212 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 OSTNP61366 133 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 SV2BQ7L1I2 683 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 FAM178BQ8IXR5 827 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 VN1R2Q8NFZ6 395 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 CASP10Q92851 521 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 BICD1Q96G01 975 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 EMILIN2Q9BXX0 1053 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 PANK2Q9BZ23 570 aa20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 TOPORSQ9NS56 1045 aaPredicted RBP20.11■□□□□ 0.81
SYNGR3-204ENST00000564642 K7ENM7 598 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 PTGESO14684 152 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 TADA2AO75478 443 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 TOM1L1O75674 476 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 HARSP12081 509 aaKnown RBP20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 PROZP22891 400 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 STAT6P42226 847 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 MATR3P43243 847 aaKnown RBP eCLIP20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ZNF131P52739 623 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 KCNC3Q14003 757 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 SMAD2Q15796 467 aaKnown RBP20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ZPBP2Q6X784 338 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 DYMQ7RTS9 669 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 SMRP1Q8NCR6 262 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 RABGGTAQ92696 567 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ZBTB45Q96K62 511 aaPredicted RBP20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ACAP3Q96P50 834 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 HERC2P3Q9BVR0 1158 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ANKFY1Q9P2R3 1169 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 ADAM28Q9UKQ2 775 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 HCFC2Q9Y5Z7 792 aa20.1■□□□□ 0.81
SYNGR3-204ENST00000564642 CASTOR2A6NHX0 329 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 F8W810 466 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 CLDN3O15551 220 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 URODP06132 367 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 SSTR3P32745 418 aaPredicted RBP20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 ABCD1P33897 745 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 PTPN14Q15678 1187 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 KIAA1841Q6NSI8 718 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 ANKRD54Q6NXT1 300 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 TAS1R1Q7RTX1 841 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 CEP120Q8N960 986 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 SNX27Q96L92 541 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 CXCL16Q9H2A7 254 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 PRKAG3Q9UGI9 489 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 CITO14578 2027 aa20.09■□□□□ 0.81
SYNGR3-204ENST00000564642 C2CD2LO14523 706 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 BRD1O95696 1058 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 HOXB8P17481 243 aaPredicted RBP20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 KLRC2P26717 231 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 GLUD2P49448 558 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms