RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 NFRKBQ6P4R8 1299 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ZNF592Q92610 1267 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 KAT2BQ92831 832 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 CGRRF1Q99675 332 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 ATP8B3O60423 1300 aa16.84■□□□□ 0.29
COMMD4-210ENST00000564587 F8VZ95 297 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 AOC2O75106 756 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 MYL3P08590 195 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 DLATP10515 647 aaKnown RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 TNNI1P19237 187 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 CASQ1P31415 396 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 MFAP3P55082 362 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 MAP2K1Q02750 393 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 NCBP1Q09161 790 aaKnown RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 DRAP1Q14919 205 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 SLC18A3Q16572 532 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 MARCH8Q5T0T0 291 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 CRELD2Q6UXH1 353 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 C15orf39Q6ZRI6 1047 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 KIAA0319LQ8IZA0 1049 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 JAKMIP2Q96AA8 810 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 ZBTB45Q96K62 511 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 IFIH1Q9BYX4 1025 aaKnown RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 UPF3AQ9H1J1 476 aaKnown RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 IFT122Q9HBG6 1241 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 PTPRHQ9HD43 1115 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 LZTFL1Q9NQ48 299 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 RAB20Q9NX57 234 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 CNTNAP2Q9UHC6 1331 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 DNAI1Q9UI46 699 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 REXO2Q9Y3B8 237 aaKnown RBP16.83■□□□□ 0.28
COMMD4-210ENST00000564587 PCDHA13Q9Y5I0 950 aa16.83■□□□□ 0.28
COMMD4-210ENST00000564587 A0A087WZ62 844 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 SEPT4O43236 478 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 RPLP2P05387 115 aaKnown RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 PLEKP08567 350 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 MCF2P10911 925 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 ARHGAP25P42331 645 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 MAGEA1P43355 309 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 ACOT2P49753 483 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 APBA1Q02410 837 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 TUBB2AQ13885 445 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 ZACNQ401N2 412 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 WDR44Q5JSH3 913 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 CCDC122Q5T0U0 273 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 PHLDB3Q6NSJ2 640 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 WDR49Q8IV35 697 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 NME8Q8N427 588 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 LMBR1Q8WVP7 490 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 NLRP7Q8WX94 980 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 SCLT1Q96NL6 688 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 FDXACB1Q9BRP7 624 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 TUBB2BQ9BVA1 445 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 GCOM2Q9BZD3 368 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 UBE2TQ9NPD8 197 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-210ENST00000564587 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
COMMD4-210ENST00000564587 ABLIM1O14639 778 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 PJA2O43164 708 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 IL18RAPO95256 599 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 RARBP10826 455 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 PURAQ00577 322 aaKnown RBP16.81■□□□□ 0.28
COMMD4-210ENST00000564587 GCNT1Q02742 428 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 BMS1Q14692 1282 aaKnown RBP16.81■□□□□ 0.28
COMMD4-210ENST00000564587 ZNF568Q3ZCX4 644 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 TRIB2Q92519 343 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 ARHGAP39Q9C0H5 1083 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 CPSF3Q9UKF6 684 aaKnown RBP16.81■□□□□ 0.28
COMMD4-210ENST00000564587 GABRQQ9UN88 632 aa16.81■□□□□ 0.28
COMMD4-210ENST00000564587 C17orf102A2RUQ5 167 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 EVI5O60447 810 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 ERLIN2O94905 339 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 C4BPAP04003 597 aaKnown RBP16.8■□□□□ 0.28
COMMD4-210ENST00000564587 VTNP04004 478 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 EDN1P05305 212 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 CYP2C9P11712 490 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 VEGFBP49765 207 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 ADAM17P78536 824 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 ARID5AQ03989 594 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 PRKCZQ05513 592 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 ZBTB33Q86T24 672 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 TRPV1Q8NER1 839 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 MYRIPQ8NFW9 859 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 POP1Q99575 1024 aaKnown RBP16.8■□□□□ 0.28
COMMD4-210ENST00000564587 ADPGKQ9BRR6 497 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.8■□□□□ 0.28
COMMD4-210ENST00000564587 PDE11AQ9HCR9 933 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 SRRDQ9UH36 339 aa16.8■□□□□ 0.28
COMMD4-210ENST00000564587 FAM189A1O60320 539 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 TBC1D8O95759 1140 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 GJB1P08034 283 aa16.79■□□□□ 0.28
COMMD4-210ENST00000564587 CLTAP09496 248 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms