RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MRPS27Q92552 414 aaKnown RBP18.95■□□□□ 0.62
USB1-209ENST00000564387 PAGE5Q96GU1 130 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 APOL6Q9BWW8 343 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 GOLPH3LQ9H4A5 285 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
USB1-209ENST00000564387 CHMP5Q9NZZ3 219 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 PARP2Q9UGN5 583 aa18.95■□□□□ 0.62
USB1-209ENST00000564387 TDRD15B5MCY1 1934 aaKnown RBP18.94■□□□□ 0.62
USB1-209ENST00000564387 A0A0B4J269 797 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 ZC3H11AO75152 810 aaKnown RBP eCLIP18.94■□□□□ 0.62
USB1-209ENST00000564387 MYL1P05976 194 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 PBX3P40426 434 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 SYKP43405 635 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 SLC11A1P49279 550 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 CASP5P51878 434 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 NOLC1Q14978 699 aaKnown RBP eCLIP18.94■□□□□ 0.62
USB1-209ENST00000564387 COL19A1Q14993 1142 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 UNC13DQ70J99 1090 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 THNSL1Q8IYQ7 743 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 CEP57L1Q8IYX8 460 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 FSIP1Q8NA03 581 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 POF1BQ8WVV4 589 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 IGSF21Q96ID5 467 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 TCHPQ9BT92 498 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 FGFBP2Q9BYJ0 223 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 CXCL16Q9H2A7 254 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 KLK14Q9P0G3 267 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 PCDHB13Q9Y5F0 798 aa18.94■□□□□ 0.62
USB1-209ENST00000564387 FSCN2O14926 492 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 HNRNPDLO14979 420 aaKnown RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 MEFVO15553 781 aaPredicted RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 ALDH2P05091 517 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 LIG4P49917 911 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 CUL4BQ13620 913 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 TIGD5Q53EQ6 642 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 L1TD1Q5T7N2 865 aaKnown RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 PDE12Q6L8Q7 609 aaKnown RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 EPM2AIP1Q7L775 607 aaPredicted RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 ZBTB33Q86T24 672 aa18.93■□□□□ 0.62
USB1-209ENST00000564387 TMEM173Q86WV6 379 aaPredicted RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 CCDC94Q9BW85 323 aaPredicted RBP18.93■□□□□ 0.62
USB1-209ENST00000564387 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 NRP1O14786 923 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 KLRC4O43908 158 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 ADRB2P07550 413 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 MYBP10242 640 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 KCNE1P15382 129 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 CASP1P29466 404 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 ASIC1P78348 528 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 KRT17Q04695 432 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 KCNA1Q09470 495 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 KYAT1Q16773 422 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 DDX53Q86TM3 631 aaKnown RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 ENGASEQ8NFI3 743 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 BCL7CQ8WUZ0 217 aaPredicted RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 BICD1Q96G01 975 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 ACAP3Q96P50 834 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 FAM193BQ96PV7 902 aaPredicted RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 PPP1R10Q96QC0 940 aaKnown RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 NSUN3Q9H649 340 aaKnown RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 TOPORSQ9NS56 1045 aaPredicted RBP18.92■□□□□ 0.62
USB1-209ENST00000564387 TBC1D7Q9P0N9 293 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 GDAQ9Y2T3 454 aa18.92■□□□□ 0.62
USB1-209ENST00000564387 NT5C1B-RDH14C9J2C7 533 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 OGTO15294 1046 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ZNF202O95125 648 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 GCNT3O95395 438 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 THP07101 528 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ADSSP30520 456 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 IRS1P35568 1242 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 AFMP43652 599 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ERVFC1P60507 584 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 POU5F1Q01860 360 aaKnown RBP18.91■□□□□ 0.62
USB1-209ENST00000564387 TUSC3Q13454 348 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 SNW1Q13573 536 aaKnown RBP18.91■□□□□ 0.62
USB1-209ENST00000564387 SLC10A6Q3KNW5 377 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 SLFN12LQ6IEE8 588 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 KRBA2Q6ZNG9 492 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 GRAMD1CQ8IYS0 662 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 RNF168Q8IYW5 571 aaPredicted RBP18.91■□□□□ 0.62
USB1-209ENST00000564387 FMR1NBQ8N0W7 255 aaPredicted RBP18.91■□□□□ 0.62
USB1-209ENST00000564387 TMEM87AQ8NBN3 555 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ZNF507Q8TCN5 953 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 SNX27Q96L92 541 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ACCSQ96QU6 501 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 RPS6KC1Q96S38 1066 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 VN1R3Q9BXE9 311 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 GBP3Q9H0R5 595 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 PLEKHA5Q9HAU0 1116 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 TLR9Q9NR96 1032 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 MARCH5Q9NX47 278 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 CNTN3Q9P232 1028 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 ANKFY1Q9P2R3 1169 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 STK39Q9UEW8 545 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 PUF60Q9UHX1 559 aaKnown RBP18.91■□□□□ 0.62
USB1-209ENST00000564387 FAN1Q9Y2M0 1017 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 XIRP2A4UGR9 3374 aa18.91■□□□□ 0.62
USB1-209ENST00000564387 MYO7AQ13402 2215 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 UNC80Q8N2C7 3258 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms