RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 MAPTP10636 758 aaKnown RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 MCF2P10911 925 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 STAT6P42226 847 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 TUSC3Q13454 348 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 FOXD4L5Q5VV16 416 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 MPZL3Q6UWV2 235 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 SV2BQ7L1I2 683 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 MYCT1Q8N699 235 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 KCNG4Q8TDN1 519 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 FOXD4L4Q8WXT5 416 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 TARS2Q9BW92 718 aaKnown RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 CDT1Q9H211 546 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 PTPRHQ9HD43 1115 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 GDAQ9Y2T3 454 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 PRG3Q9Y2Y8 225 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-207ENST00000564060 VCANP13611 3396 aa21.78■■□□□ 1.08
CMTM3-207ENST00000564060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-207ENST00000564060 C2orf71A6NGG8 1288 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 HIDE1A8MVS5 230 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 K7ENM7 598 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 TNFRSF10AO00220 468 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 TRAK2O60296 914 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 TOM1L1O75674 476 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 CXCL14O95715 111 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 GRM5P41594 1212 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 DLX2Q07687 328 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-207ENST00000564060 SMAD4Q13485 552 aaKnown RBP21.77■■□□□ 1.08
CMTM3-207ENST00000564060 HAUS6Q7Z4H7 955 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 FAM178BQ8IXR5 827 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 BCL7CQ8WUZ0 217 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-207ENST00000564060 ZHX3Q9H4I2 956 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 TFIP11Q9UBB9 837 aaKnown RBP21.77■■□□□ 1.08
CMTM3-207ENST00000564060 NCOR1O75376 2440 aa21.77■■□□□ 1.08
CMTM3-207ENST00000564060 CUL9Q8IWT3 2517 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 CUTAO60888 179 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 BRD1O95696 1058 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 GLP2RO95838 553 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 SOD2P04179 222 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 URODP06132 367 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 PROZP22891 400 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 COASYQ13057 564 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 BECN1Q14457 450 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 TMEM184AQ6ZMB5 413 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 CASP10Q92851 521 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 BICD1Q96G01 975 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 MSLNLQ96KJ4 702 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 MARCH5Q9NX47 278 aa21.76■■□□□ 1.07
CMTM3-207ENST00000564060 CLDN3O15551 220 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 IL9P15248 144 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
CMTM3-207ENST00000564060 PPFIBP1Q86W92 1011 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 HERC2P3Q9BVR0 1158 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 EMILIN2Q9BXX0 1053 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 MRPL17Q9NRX2 175 aaKnown RBP21.75■■□□□ 1.07
CMTM3-207ENST00000564060 CLEC1BQ9P126 229 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 ANKFY1Q9P2R3 1169 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 SEL1LQ9UBV2 794 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 PRKAG3Q9UGI9 489 aa21.75■■□□□ 1.07
CMTM3-207ENST00000564060 PTGESO14684 152 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 MBTPS2O43462 519 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 HOXB8P17481 243 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-207ENST00000564060 MATR3P43243 847 aaKnown RBP eCLIP21.74■■□□□ 1.07
CMTM3-207ENST00000564060 KCNC3Q14003 757 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 HSP90AA2PQ14568 343 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-207ENST00000564060 PTPN14Q15678 1187 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 ZBTB33Q86T24 672 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 SMRP1Q8NCR6 262 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 ACAP3Q96P50 834 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 VN1R3Q9BXE9 311 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 LRRC27Q9C0I9 530 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 CUEDC2Q9H467 287 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 ADAM28Q9UKQ2 775 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 BARX2Q9UMQ3 279 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-207ENST00000564060 HCFC2Q9Y5Z7 792 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 TCHHQ07283 1943 aa21.74■■□□□ 1.07
CMTM3-207ENST00000564060 HNRNPDLO14979 420 aaKnown RBP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 GAP43P17677 238 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 LIG4P49917 911 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 SMAD2Q15796 467 aaKnown RBP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 CLUL1Q15846 466 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 KYAT1Q16773 422 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 FOXD4L6Q3SYB3 417 aaPredicted RBP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 KIAA1841Q6NSI8 718 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 FUT10Q6P4F1 479 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 FOXD4L3Q6VB84 417 aaPredicted RBP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 DYMQ7RTS9 669 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 GPR65Q8IYL9 337 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 CEP120Q8N960 986 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 DDX12PQ92771 950 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 UROC1Q96N76 676 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 POP1Q99575 1024 aaKnown RBP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 ST6GALNAC4Q9H4F1 302 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 SLC38A7Q9NVC3 462 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 TBX20Q9UMR3 447 aa21.73■■□□□ 1.07
CMTM3-207ENST00000564060 SF3B1O75533 1304 aaKnown RBP eCLIP21.73■■□□□ 1.07
CMTM3-207ENST00000564060 TTC28Q96AY4 2481 aa21.72■■□□□ 1.07
CMTM3-207ENST00000564060 CASTOR2A6NHX0 329 aa21.72■■□□□ 1.07
CMTM3-207ENST00000564060 ABLIM1O14639 778 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms