RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 ADD2P35612 726 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 SOX9P48436 509 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 DSG1Q02413 1049 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 STOX1Q6ZVD7 989 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 TAS1R1Q7RTX1 841 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 RALGPS2Q86X27 583 aaPredicted RBP12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 FAM26EQ8N5C1 309 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 DEPDC1BQ8WUY9 529 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 FBXW11Q9UKB1 542 aa12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 MRPS23Q9Y3D9 190 aaKnown RBP12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 NUP210Q8TEM1 1887 aaPredicted RBP12.29□□□□□ -0.44
HDGFL3-204ENST00000563790 CSMD2Q7Z408 3487 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 PLK4O00444 970 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 NRG2O14511 850 aaPredicted RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 ZNF263O14978 683 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 CCL16O15467 120 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 EFEMP2O95967 443 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 BCKDHBP21953 392 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 HOXD12P35452 270 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 DPP6P42658 865 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 TMPRSS3P57727 454 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 TFAP4Q01664 338 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 SP4Q02446 784 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 GFPT1Q06210 699 aaPredicted RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 PON2Q15165 354 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 SMAD1Q15797 465 aaKnown RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 PPM1LQ5SGD2 360 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 ARHGAP40Q5TG30 622 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 PEAR1Q5VY43 1037 aaPredicted RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 CSGALNACT1Q8TDX6 532 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 CAPN10Q9HC96 672 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 FSCN3Q9NQT6 498 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 FNIP2Q9P278 1114 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 SLC6A14Q9UN76 642 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 POLIQ9UNA4 740 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 INVSQ9Y283 1065 aa12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 MYO18AQ92614 2054 aaKnown RBP12.28□□□□□ -0.44
HDGFL3-204ENST00000563790 SPATA31C2B4DYI2 1134 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 APBB3O95704 486 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 CFIP05156 583 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 CCND2P30279 289 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 HSD17B4P51659 736 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 CRYBB1P53674 252 aaPredicted RBP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 UCNP55089 124 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 GHRHRQ02643 423 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 PLCB4Q15147 1175 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 GNPTABQ3T906 1256 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 USP39Q53GS9 565 aaKnown RBP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 NOMO2Q5JPE7 1267 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 FAM78AQ5JUQ0 283 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 GIMAP6Q6P9H5 292 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 OR2I1PQ8NGU4 316 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 SNRNP27Q8WVK2 155 aaKnown RBP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 TRAPPC12Q8WVT3 735 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 EAF2Q96CJ1 260 aaPredicted RBP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 OSMRQ99650 979 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 GBP3Q9H0R5 595 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 DNMT3BQ9UBC3 853 aaKnown RBP12.27□□□□□ -0.45
HDGFL3-204ENST00000563790 GRNP28799 593 aaKnown RBP12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 NOVP48745 357 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 SLC5A9Q2M3M2 681 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 C2orf27AQ580R0 203 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 LIN9Q5TKA1 542 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 MTHFD1LQ6UB35 978 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 WDR63Q8IWG1 891 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 GPR65Q8IYL9 337 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 KIAA0319LQ8IZA0 1049 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 FGF11Q92914 225 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 ASB16Q96NS5 453 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 INPP4AQ96PE3 977 aaPredicted RBP12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 SENP7Q9BQF6 1050 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 CPNE5Q9HCH3 593 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 AVENQ9NQS1 362 aaPredicted RBP12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 CHST7Q9NS84 486 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 POLR3BQ9NW08 1133 aaPredicted RBP12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 PCOLCE2Q9UKZ9 415 aa12.26□□□□□ -0.45
HDGFL3-204ENST00000563790 PNMA6EA0A0J9YXQ4 647 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 GSG1L2A8MUP6 293 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 SERPINF2P08697 491 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 CEBPBP17676 345 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 DUOXA1Q1HG43 343 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 CCDC184Q52MB2 194 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 GLB1LQ6UWU2 654 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 GLYCTKQ8IVS8 523 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 DAGLBQ8NCG7 672 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 CEP76Q8TAP6 659 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 TMEM175Q9BSA9 504 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 FAN1Q9Y2M0 1017 aa12.25□□□□□ -0.45
HDGFL3-204ENST00000563790 GSTTP1A0A1W2PQM5 241 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms