RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 DDX53Q86TM3 631 aaKnown RBP10.43□□□□□ -0.74
RPAP1-205ENST00000563293 CATSPER3Q86XQ3 398 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 C4orf19Q8IY42 314 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 IGSF21Q96ID5 467 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 MMTAG2Q9BU76 263 aaKnown RBP10.43□□□□□ -0.74
RPAP1-205ENST00000563293 NUP62CLQ9H1M0 184 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 TNMDQ9H2S6 317 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 GOLPH3LQ9H4A5 285 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 NRDE2Q9H7Z3 1164 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
RPAP1-205ENST00000563293 DZANK1Q9NVP4 752 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 RNF216Q9NWF9 866 aaPredicted RBP10.43□□□□□ -0.74
RPAP1-205ENST00000563293 DLL3Q9NYJ7 618 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 KCND2Q9NZV8 630 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 DLGAP2Q9P1A6 1054 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 DNAJB4Q9UDY4 337 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 SAMM50Q9Y512 469 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 PPME1Q9Y570 386 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 MAFBQ9Y5Q3 323 aaPredicted RBP10.43□□□□□ -0.74
RPAP1-205ENST00000563293 IRAK3Q9Y616 596 aa10.43□□□□□ -0.74
RPAP1-205ENST00000563293 EML1O00423 815 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 CHMP2AO43633 222 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 LILRB3O75022 631 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 LRRN2O75325 713 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SMC2O95347 1197 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SSBP05455 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 GALTP07902 379 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SP9P0CG40 484 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SPATA31C1P0DKV0 1188 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 ZSCAN20P17040 1043 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 EIF4BP23588 611 aaKnown RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 CLCN4P51793 760 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 AFF1P51825 1210 aaKnown RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 DRP2Q13474 957 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 PUM1Q14671 1186 aaKnown RBP eCLIP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 KARSQ15046 597 aaKnown RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 PTPN14Q15678 1187 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 E2F4Q16254 413 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 RSPO4Q2I0M5 234 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 ODR4Q5SWX8 454 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 USP49Q70CQ1 688 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SV2BQ7L1I2 683 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 OTUD6AQ7L8S5 288 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 OTOP3Q7RTS5 596 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 ZNF280BQ86YH2 543 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 CKAP2LQ8IYA6 745 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 EXOC8Q8IYI6 725 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 MAML2Q8IZL2 1156 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 SLC44A3Q8N4M1 653 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 DHX58Q96C10 678 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 ACSF2Q96CM8 615 aaPredicted RBP10.42□□□□□ -0.74
RPAP1-205ENST00000563293 TMEM169Q96HH4 297 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 KLHL5Q96PQ7 755 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 TBC1D13Q9NVG8 400 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 KBTBD4Q9NVX7 518 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 AKT3Q9Y243 479 aa10.42□□□□□ -0.74
RPAP1-205ENST00000563293 PP2D1A8MPX8 630 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 ACTN4O43707 911 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 ZNF862O60290 1169 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 MED24O75448 989 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CNPP09543 421 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 PLCG1P19174 1290 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CDC25AP30304 524 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 SLC11A1P49279 550 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 GPC3P51654 580 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CAVIN1Q6NZI2 390 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CNNM4Q6P4Q7 775 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 RBM43Q6ZSC3 357 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 FAM43BQ6ZT52 329 aaPredicted RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CCDC149Q6ZUS6 474 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 TAS1R1Q7RTX1 841 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 PDILTQ8N807 584 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 SUMF1Q8NBK3 374 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 LARP4BQ92615 738 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 RAD54LQ92698 747 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 GJA10Q969M2 543 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 CCDC47Q96A33 483 aaKnown RBP10.41□□□□□ -0.74
RPAP1-205ENST00000563293 FAM167AQ96KS9 214 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 PNMA5Q96PV4 448 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 MYADMQ96S97 322 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 TIPINQ9BVW5 301 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 SFXN1Q9H9B4 322 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 TBC1D17Q9HA65 648 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 NRBP2Q9NSY0 501 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 ANKEF1Q9NU02 776 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 GABBR1Q9UBS5 961 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 WNT16Q9UBV4 365 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 SERTAD1Q9UHV2 236 aa10.41□□□□□ -0.74
RPAP1-205ENST00000563293 USP24Q9UPU5 2620 aa10.4□□□□□ -0.74
RPAP1-205ENST00000563293 OFD1O75665 1012 aa10.4□□□□□ -0.74
RPAP1-205ENST00000563293 DDHD2O94830 711 aa10.4□□□□□ -0.74
RPAP1-205ENST00000563293 KLRC2P26717 231 aa10.4□□□□□ -0.74
RPAP1-205ENST00000563293 PHKA2P46019 1235 aa10.4□□□□□ -0.74
RPAP1-205ENST00000563293 POLGP54098 1239 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms