RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 ADAM7Q9H2U9 754 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 EPHX3Q9H6B9 360 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 RXFP1Q9HBX9 757 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 LARSQ9P2J5 1176 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 ADAM28Q9UKQ2 775 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 MTMR6Q9Y217 621 aa13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 PRG3Q9Y2Y8 225 aaPredicted RBP13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 SRPRBQ9Y5M8 271 aaKnown RBP13.43□□□□□ -0.26
NSMCE1-204ENST00000563273 TCF20Q9UGU0 1960 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 DCXO43602 365 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 PAPLNO95428 1278 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CNPP09543 421 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 MAPTP10636 758 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 MCF2P10911 925 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 GLUD2P49448 558 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CLCN4P51793 760 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 ZNF131P52739 623 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CREMQ03060 361 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 HSP90AA2PQ14568 343 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 NAB2Q15742 525 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 ARSHQ5FYA8 562 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 HERC4Q5GLZ8 1057 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 KIAA0319Q5VV43 1072 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CES5AQ6NT32 575 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 LLGL2Q6P1M3 1020 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 ZPBP2Q6X784 338 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 KLHL5Q96PQ7 755 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 RHOBTB2Q9BYZ6 727 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CDT1Q9H211 546 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 POLD4Q9HCU8 107 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 TOPORSQ9NS56 1045 aaPredicted RBP13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 BLOC1S4Q9NUP1 217 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 KLK14Q9P0G3 267 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 DPP7Q9UHL4 492 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 CLIC4Q9Y696 253 aa13.42□□□□□ -0.26
NSMCE1-204ENST00000563273 SF3B1O75533 1304 aaKnown RBP eCLIP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ABLIM1O14639 778 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 SLC16A4O15374 487 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 STX6O43752 255 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 TOM1L1O75674 476 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 SSBP05455 408 aaKnown RBP eCLIP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ADH1AP07327 375 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 LIG1P18858 919 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 PLCG1P19174 1290 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 CA8P35219 290 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 MTHFRP42898 656 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 NCKAP1LP55160 1127 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ELAVL2Q12926 359 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 STRN3Q13033 797 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 USP41Q3LFD5 358 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ZNF568Q3ZCX4 644 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 TMEM31Q5JXX7 168 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 FUT10Q6P4F1 479 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 MPZL3Q6UWV2 235 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 ALKAL1Q6UXT8 129 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 CYP26C1Q6V0L0 522 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 CMASQ8NFW8 434 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 HDAC7Q8WUI4 952 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 RAD54LQ92698 747 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 RIPOR3Q96MK2 946 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 UROC1Q96N76 676 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 PPP1R10Q96QC0 940 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 CCDC94Q9BW85 323 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 FNIP2Q9P278 1114 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 STK17AQ9UEE5 414 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 FBXO2Q9UK22 296 aaPredicted RBP13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 USP20Q9Y2K6 914 aa13.41□□□□□ -0.26
NSMCE1-204ENST00000563273 SFI1A8K8P3 1242 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 TADA2AO75478 443 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 KCNE1P15382 129 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 EPCAMP16422 314 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 KLRC2P26717 231 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 DDIT3P35638 169 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 YARSP54577 528 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 GRIN1Q05586 938 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 SLC39A14Q15043 492 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 KARSQ15046 597 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 KIAA1841Q6NSI8 718 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 C15orf39Q6ZRI6 1047 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 GPBP1Q86WP2 473 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 RNF135Q8IUD6 432 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 LRRC15Q8TF66 581 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 FBXL18Q96ME1 805 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 PLIN2Q99541 437 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 REEP2Q9BRK0 252 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 GPR62Q9BZJ7 368 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 PARVGQ9HBI0 331 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 SLC38A7Q9NVC3 462 aa13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.4□□□□□ -0.26
NSMCE1-204ENST00000563273 F8W810 466 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms