RNA–Protein interactions for RNA: ENST00000563155.1

PARN-208, Transcript of poly(A)-specific ribonuclease, human

TSL 2

Gene PARN, Length 335 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PARN-208	ENST00000563155	MAP2K6	P52564	334 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	MGAT2	Q10469	447 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	R3HDM1	Q15032	1099 aa	Known RBP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	PWP2	Q15269	919 aa	Known RBP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	UBE3C	Q15386	1083 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	SAFB	Q15424	915 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	CCDC178	Q5BJE1	867 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	SLFN13	Q68D06	897 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	SWSAP1	Q6NVH7	229 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	NPNT	Q6UXI9	565 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155		Q6ZVL8	140 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	RHOT1	Q8IXI2	618 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	GPR156	Q8NFN8	814 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	FBXO18	Q8NFZ0	1043 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	HOXB13	Q92826	284 aa	Predicted RBP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	HDAC10	Q969S8	669 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	TTC17	Q96AE7	1141 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	NT5C1B	Q96P26	610 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	APOL5	Q9BWW9	433 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	BHMT2	Q9H2M3	363 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	RBM12	Q9NTZ6	932 aa	Known RBP	4.97	□□□□□ -1.61
PARN-208	ENST00000563155	SIK3	Q9Y2K2	1263 aa		4.97	□□□□□ -1.61
PARN-208	ENST00000563155	ADCY6	O43306	1168 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	KLHL18	O94889	574 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ZBED1	O96006	694 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	LDHA	P00338	332 aa	Known RBP	4.96	□□□□□ -1.62
PARN-208	ENST00000563155	HMGCR	P04035	888 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	CYP1A1	P04798	512 aa	Predicted RBP	4.96	□□□□□ -1.62
PARN-208	ENST00000563155	IFIT2	P09913	472 aa	Known RBP	4.96	□□□□□ -1.62
PARN-208	ENST00000563155	SLC5A1	P13866	664 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ZNF28	P17035	718 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	SERPINB3	P29508	390 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	IL13	P35225	146 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	SLC6A9	P48067	706 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	KLF10	Q13118	480 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ADAM15	Q13444	863 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	TOP3A	Q13472	1001 aa	Predicted RBP	4.96	□□□□□ -1.62
PARN-208	ENST00000563155	PICALM	Q13492	652 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ACAP1	Q15027	740 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	KIAA0753	Q2KHM9	967 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ARHGEF18	Q6ZSZ5	1173 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	MIGA2	Q7L4E1	593 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	SAMD3	Q8N6K7	520 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	PLBD2	Q8NHP8	589 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	MORC4	Q8TE76	937 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	RGMA	Q96B86	450 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	C7orf25	Q9BPX7	421 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	NAA15	Q9BXJ9	866 aa	Known RBP	4.96	□□□□□ -1.62
PARN-208	ENST00000563155	KIAA1683	Q9H0B3	1180 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	TMEM168	Q9H0V1	697 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	TMEM60	Q9H2L4	133 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	LDAH	Q9H6V9	325 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	FAM204A	Q9H8W3	233 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ARMT1	Q9H993	441 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	NR2E3	Q9Y5X4	410 aa		4.96	□□□□□ -1.62
PARN-208	ENST00000563155	ANO9	A1A5B4	782 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	PLEKHD1	A6NEE1	506 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	FAM227A	F5H4B4	570 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	WNT10B	O00744	389 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	FTL	P02792	175 aa	Predicted RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	LTA4H	P09960	611 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	POLD1	P28340	1107 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	RRAD	P55042	308 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	EIF4H	Q15056	248 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	SMN1	Q16637	294 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	ZNF585A	Q6P3V2	769 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	SKAP1	Q86WV1	359 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	KIAA0319L	Q8IZA0	1049 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	KLHDC4	Q8TBB5	520 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	CCHCR1	Q8TD31	782 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	YTHDC1	Q96MU7	727 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	WRNIP1	Q96S55	665 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	DMRTA2	Q96SC8	542 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	STRBP	Q96SI9	672 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	ARPC5L	Q9BPX5	153 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	PDCD2L	Q9BRP1	358 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	ZNF700	Q9H0M5	742 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	L2HGDH	Q9H9P8	463 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	TLR9	Q9NR96	1032 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	ING3	Q9NXR8	418 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	STAP2	Q9UGK3	403 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	TAGLN3	Q9UI15	199 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	PHTF1	Q9UMS5	762 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	POLH	Q9Y253	713 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	COMMD10	Q9Y6G5	202 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	RPTOR	Q8N122	1335 aa		4.95	□□□□□ -1.62
PARN-208	ENST00000563155	WDR33	Q9C0J8	1336 aa	Known RBP	4.95	□□□□□ -1.62
PARN-208	ENST00000563155	C2orf78	A6NCI8	922 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	PQBP1	O60828	265 aa	Known RBP	4.94	□□□□□ -1.62
PARN-208	ENST00000563155	ZNF623	O75123	536 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	FSBP	O95073	299 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	ZNF888	P0CJ79	500 aa	Predicted RBP	4.94	□□□□□ -1.62
PARN-208	ENST00000563155	ETV4	P43268	484 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	PCOLCE	Q15113	449 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	MST1L	Q2TV78	715 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	HS1BP3	Q53T59	392 aa		4.94	□□□□□ -1.62
PARN-208	ENST00000563155	CCDC157	Q569K6	752 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms