RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 FAM126AQ9BYI3 521 aaPredicted RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 GPR62Q9BZJ7 368 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 PARD6AQ9NPB6 346 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 LTB4R2Q9NPC1 389 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 SPATA6Q9NWH7 488 aaPredicted RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 NCDNQ9UBB6 729 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 FBXW11Q9UKB1 542 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 PRG3Q9Y2Y8 225 aaPredicted RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 IPPQ9Y573 584 aa9.31□□□□□ -0.92
CKLF-208ENST00000563092 MTCL1Q9Y4B5 1905 aaKnown RBP9.31□□□□□ -0.92
CKLF-208ENST00000563092 KLF18A0A0U1RQI7 1052 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 CCDC196A0A1B0GTZ2 297 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 FAM170BA6NMN3 283 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 M0R2N6 131 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 OR1G1P47890 313 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 PSMC5P62195 406 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 PFKPQ01813 784 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 CREMQ03060 361 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 CSTF1Q05048 431 aaKnown RBP9.3□□□□□ -0.92
CKLF-208ENST00000563092 LAMTOR4Q0VGL1 99 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 USP41Q3LFD5 358 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 ADCK5Q3MIX3 580 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 FUT10Q6P4F1 479 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 MOXD1Q6UVY6 613 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 MTSS1LQ765P7 747 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 MIER3Q7Z3K6 550 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 ATRIPQ8WXE1 791 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 FGF13Q92913 245 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 PHKBQ93100 1093 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 B3GALT6Q96L58 329 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 GAD1Q99259 594 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 NELL2Q99435 816 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 EIF2AQ9BY44 585 aaKnown RBP9.3□□□□□ -0.92
CKLF-208ENST00000563092 PIDD1Q9HB75 910 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 WRAP73Q9P2S5 460 aaPredicted RBP9.3□□□□□ -0.92
CKLF-208ENST00000563092 GIT1Q9Y2X7 761 aa9.3□□□□□ -0.92
CKLF-208ENST00000563092 MIA3Q5JRA6 1907 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 MYH15Q9Y2K3 1946 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 DCDC2BA2VCK2 349 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 DDX11L8A8MPP1 907 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 EML1O00423 815 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 TSPAN1O60635 241 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 MYBP10242 640 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 ITGA4P13612 1032 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 TARSP26639 723 aaKnown RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 AXLP30530 894 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 MLH1P40692 756 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 RFC5P40937 340 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 SCNN1GP51170 649 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 NPEPPSP55786 919 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 AMHR2Q16671 573 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 ST3GAL2Q16842 350 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 RTP2Q5QGT7 225 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 ZBTB41Q5SVQ8 909 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 PLA2G4FQ68DD2 849 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 GRASPQ7Z6J2 395 aaPredicted RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 EXOC8Q8IYI6 725 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 ST13P5Q8NFI4 369 aaPredicted RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 ITFG1Q8TB96 612 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 PSPC1Q8WXF1 523 aaKnown RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 SLC7A3Q8WY07 619 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 PIK3R5Q8WYR1 880 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 SECISBP2LQ93073 1101 aaKnown RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 COLEC11Q9BWP8 271 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 AGXT2Q9BYV1 514 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 ADAM28Q9UKQ2 775 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 VAV3Q9UKW4 847 aa9.29□□□□□ -0.92
CKLF-208ENST00000563092 CDV3Q9UKY7 258 aaKnown RBP9.29□□□□□ -0.92
CKLF-208ENST00000563092 BHMG1C9JSJ3 638 aaPredicted RBP9.28□□□□□ -0.92
CKLF-208ENST00000563092 SLC30A4O14863 429 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 ASAP2O43150 1006 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 LRP3O75074 770 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 ECI2O75521 394 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 TDP2O95551 362 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 SRGAP2CP0DJJ0 459 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 RPL17P18621 184 aaKnown RBP9.28□□□□□ -0.92
CKLF-208ENST00000563092 QARSP47897 775 aaKnown RBP9.28□□□□□ -0.92
CKLF-208ENST00000563092 PTENP60484 403 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 NTHL1P78549 312 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 UBXN2BQ14CS0 331 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 NPY5RQ15761 445 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 RTL10Q7L3V2 364 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 FERMT3Q86UX7 667 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 NPAS3Q8IXF0 933 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 CCDC148Q8NFR7 591 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 LNX1Q8TBB1 728 aaPredicted RBP9.28□□□□□ -0.92
CKLF-208ENST00000563092 TBCKQ8TEA7 893 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 KCNB2Q92953 911 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 TMEM143Q96AN5 459 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 NFKBIZQ9BYH8 718 aa9.28□□□□□ -0.92
CKLF-208ENST00000563092 CSRNP2Q9H175 543 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms