RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ELMOD1Q8N336 334 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 FBF1Q8TES7 1133 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 GIPC3Q8TF64 312 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 DDI1Q8WTU0 396 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 CCDC12Q8WUD4 166 aaPredicted RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 NAT14Q8WUY8 206 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 DNAJC9Q8WXX5 260 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 NEURL2Q9BR09 285 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 LY9Q9HBG7 655 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 PIK3C2GO75747 1445 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 NKTRP30414 1462 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 A0A088AWK7 358 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 FUOMA2VDF0 154 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 CFAP73A6NFT4 308 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 APOL1O14791 398 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 RAD23BP54727 409 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 NOP14P78316 857 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 PFKPQ01813 784 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 ROR1Q01973 937 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 RCN2Q14257 317 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 MAPRE2Q15555 327 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 CMPK2Q5EBM0 449 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 METTL24Q5JXM2 366 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 RNASEH2BQ5TBB1 312 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 ARHGAP11AQ6P4F7 1023 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 HHIPL2Q6UWX4 724 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 PEX26Q7Z412 305 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 C2orf69Q8N8R5 385 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 SEC16BQ96JE7 1060 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 ZSCAN31Q96LW9 406 aaPredicted RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 DDX50Q9BQ39 737 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 ARMC7Q9H6L4 198 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 ZFYVE28Q9HCC9 887 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 KCNQ5Q9NR82 932 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 ZNF624Q9P2J8 865 aaPredicted RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 FAM8A1Q9UBU6 413 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 KLHL3Q9UH77 587 aa9.98□□□□□ -0.81
CDH1-205ENST00000562836 CPSF3Q9UKF6 684 aaKnown RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
CDH1-205ENST00000562836 CNOT3O75175 753 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 TUBBP07437 444 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 IL10P22301 178 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ARHGDIAP52565 204 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ARFIP1P53367 373 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 NLRP11P59045 1033 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 RHAGQ02094 409 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 TAP1Q03518 808 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 FUT2Q10981 343 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 KCNJ8Q15842 424 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 SGO2Q562F6 1265 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 CACNA2D3Q8IZS8 1091 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 FMR1NBQ8N0W7 255 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 REXO1Q8N1G1 1221 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 FBXL16Q8N461 479 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 MLKLQ8NB16 471 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 P3H4Q92791 437 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 OLFM3Q96PB7 478 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 CENPKQ9BS16 269 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 NUP62CLQ9H1M0 184 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 FBXO2Q9UK22 296 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 TNNQ9UQP3 1299 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 AP3M1Q9Y2T2 418 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 MYO3BQ8WXR4 1341 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 RNF17Q9BXT8 1623 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 IQANK1A0A1B0GTG1 560 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 E9PBE3 544 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ATP6V1G2-DDX39BF2Z307 99 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 PFDN6O15212 129 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 GNAZP19086 355 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ATP6V1E1P36543 226 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 UBXN1Q04323 297 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 CD300CQ08708 224 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 OASLQ15646 514 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 FAM133BQ5BKY9 247 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 FCRLBQ6BAA4 426 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 TICAM1Q8IUC6 712 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ZDHHC17Q8IUH5 632 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 MRPS27Q92552 414 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 HSPH1Q92598 858 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 DENND2DQ9H6A0 471 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 RUBCNLQ9H714 662 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 NKX1-2Q9UD57 310 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 FETUBQ9UGM5 382 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 TRAF3IP3Q9Y228 551 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 STK38LQ9Y2H1 464 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 NFE2L3Q9Y4A8 694 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 PLA2R1Q13018 1463 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 UNC13BO14795 1591 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 SMIM23A6NLE4 172 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 PCP4P48539 62 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 RTP1P59025 263 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ADAM17P78536 824 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ATP11AP98196 1134 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 R3HDM1Q15032 1099 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 TGFBIQ15582 683 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms