RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
HERC1-212ENST00000561348 AXDND1Q5T1B0 1012 aaPredicted RBP11.09□□□□□ -0.63
HERC1-212ENST00000561348 LLGL2Q6P1M3 1020 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 MPZL3Q6UWV2 235 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 ADGRD2Q7Z7M1 963 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 SYCP3Q8IZU3 236 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 SLC39A11Q8N1S5 342 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 MRPS27Q92552 414 aaKnown RBP11.09□□□□□ -0.63
HERC1-212ENST00000561348 HLA-CQ95604 372 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 LMAN2LQ9H0V9 348 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 CDT1Q9H211 546 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 KCNH3Q9ULD8 1083 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 TNFSF13BQ9Y275 285 aa11.09□□□□□ -0.63
HERC1-212ENST00000561348 TDRD15B5MCY1 1934 aaKnown RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 H3BQ06 376 aaPredicted RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 NRP1O14786 923 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 CXCL14O95715 111 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 THP07101 528 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 POU3F3P20264 500 aaPredicted RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 NDUFV1P49821 464 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 NCKAP1LP55160 1127 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 AMPD3Q01432 767 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 SPAG1Q07617 926 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 RESP18Q5W5W9 173 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 TMEM173Q86WV6 379 aaPredicted RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 CCDC65Q8IXS2 484 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 GRAMD1CQ8IYS0 662 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 IGSF21Q96ID5 467 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 ACAP3Q96P50 834 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 NTPCRQ9BSD7 190 aaKnown RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 COLEC11Q9BWP8 271 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 LRRC27Q9C0I9 530 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 SCAND2PQ9GZW5 306 aaPredicted RBP11.08□□□□□ -0.64
HERC1-212ENST00000561348 CXCL16Q9H2A7 254 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 SERTAD1Q9UHV2 236 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 TBX20Q9UMR3 447 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 COL6A3P12111 3177 aa11.08□□□□□ -0.64
HERC1-212ENST00000561348 TCHHQ07283 1943 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
HERC1-212ENST00000561348 HIDE1A8MVS5 230 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 F8W810 466 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 LINC01565O15544 149 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 TADA2AO75478 443 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 TOM1L1O75674 476 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 MYBP10242 640 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 PFKFB1P16118 471 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 GAP43P17677 238 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 KCNQ1P51787 676 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 UBE3AQ05086 875 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 HYAL1Q12794 435 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 GRIK3Q13003 919 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 CAMK1Q14012 370 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 NOLC1Q14978 699 aaKnown RBP eCLIP11.07□□□□□ -0.64
HERC1-212ENST00000561348 KIAA1841Q6NSI8 718 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 CEP57Q86XR8 500 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 GLYCTKQ8IVS8 523 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 FSIP1Q8NA03 581 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
HERC1-212ENST00000561348 MSTO1Q9BUK6 570 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 APOL5Q9BWW9 433 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 IKZF4Q9H2S9 585 aa11.07□□□□□ -0.64
HERC1-212ENST00000561348 TOPORSQ9NS56 1045 aaPredicted RBP11.07□□□□□ -0.64
HERC1-212ENST00000561348 TISP43B9A030 160 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 ANKRD63C9JTQ0 380 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 PRPF6O94906 941 aaKnown RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 MCF2P10911 925 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 GRM5P41594 1212 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 SYKP43405 635 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 ZNF131P52739 623 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 MRPS5P82675 430 aaKnown RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 RBM10P98175 930 aaKnown RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 PLCB3Q01970 1234 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 ADALQ6DHV7 355 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 ZPBP2Q6X784 338 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 COLGALT2Q8IYK4 626 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 B3GALT6Q96L58 329 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 PAAF1Q9BRP4 392 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 TMEM175Q9BSA9 504 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 TNMDQ9H2S6 317 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 CUEDC2Q9H467 287 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 UBE2ZQ9H832 354 aaPredicted RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 GOLGA2P5Q9HBQ8 144 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 EXOC7Q9UPT5 735 aa11.06□□□□□ -0.64
HERC1-212ENST00000561348 MORC2Q9Y6X9 1032 aaPredicted RBP11.06□□□□□ -0.64
HERC1-212ENST00000561348 TCF20Q9UGU0 1960 aaKnown RBP11.05□□□□□ -0.64
HERC1-212ENST00000561348 PTGESO14684 152 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 TRANK1O15050 2925 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 CXCL8P10145 99 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 CMA1P23946 247 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 TNFSF9P41273 254 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 ACOT2P49753 483 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 NDUFA8P51970 172 aa11.05□□□□□ -0.64
HERC1-212ENST00000561348 KCNA1Q09470 495 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms