RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 CAPN2P17655 700 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 PON1P27169 355 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 THPOP40225 353 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 MXI1P50539 228 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 DLG4P78352 724 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CLDN10P78369 228 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 KCNMA1Q12791 1236 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 SLC27A1Q6PCB7 646 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CRELD2Q6UXH1 353 aaPredicted RBP11.17□□□□□ -0.62
USP3-219ENST00000561326 ZSCAN30Q86W11 494 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 FMNL3Q8IVF7 1028 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 BRSK2Q8IWQ3 736 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 THNSL1Q8IYQ7 743 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CCDC155Q8N6L0 562 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 TC2NQ8N9U0 490 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 ZSWIM2Q8NEG5 633 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CPB2Q96IY4 423 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 BAG1Q99933 345 aaPredicted RBP11.17□□□□□ -0.62
USP3-219ENST00000561326 LSM14BQ9BX40 385 aaKnown RBP11.17□□□□□ -0.62
USP3-219ENST00000561326 TRIM6Q9C030 488 aaPredicted RBP11.17□□□□□ -0.62
USP3-219ENST00000561326 HAPLN2Q9GZV7 340 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 PDZD7Q9H5P4 517 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 GCNT4Q9P109 453 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CEP72Q9P209 647 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CPSF3Q9UKF6 684 aaKnown RBP11.17□□□□□ -0.62
USP3-219ENST00000561326 OGDHLQ9ULD0 1010 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 ZKSCAN5Q9Y2L8 839 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
USP3-219ENST00000561326 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.17□□□□□ -0.62
USP3-219ENST00000561326 LRRIQ3A6PVS8 624 aaPredicted RBP11.16□□□□□ -0.62
USP3-219ENST00000561326 RPS6KA5O75582 802 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 MYCP01106 439 aaPredicted RBP11.16□□□□□ -0.62
USP3-219ENST00000561326 SLC9A1P19634 815 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 RFX1P22670 979 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 GCLMP48507 274 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 KLK7P49862 253 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP3-219ENST00000561326 PPP3CAQ08209 521 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 MTFR1Q15390 333 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 DUOXA2Q1HG44 320 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 KLHDC7AQ5VTJ3 777 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 EEF1DP3Q658K8 133 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 CYP26C1Q6V0L0 522 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 TMTC1Q8IUR5 882 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 CD302Q8IX05 232 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 USP38Q8NB14 1042 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 SLC43A3Q8NBI5 491 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 FAM212AQ96EL1 285 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 FAM81BQ96LP2 452 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 ACAP3Q96P50 834 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 CCDC94Q9BW85 323 aaPredicted RBP11.16□□□□□ -0.62
USP3-219ENST00000561326 TMEM117Q9H0C3 514 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 CDT1Q9H211 546 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 PDE11AQ9HCR9 933 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 AGPAT5Q9NUQ2 364 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 FBXL5Q9UKA1 691 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 MYO6Q9UM54 1294 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 DNAH12Q6ZR08 3092 aa11.16□□□□□ -0.62
USP3-219ENST00000561326 ABLIM1O14639 778 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 TLR3O15455 904 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 B4GALT4O60513 344 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 PHACTR2O75167 634 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 TNNC2P02585 160 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 CCDC172P0C7W6 258 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 STAG3L1P0CL83 205 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 FGFR4P22455 802 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 LBX1P52954 281 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 YARSP54577 528 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 POLR2FP61218 127 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 CBWD6Q4V339 395 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 WDR44Q5JSH3 913 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 CBWD3Q5JTY5 395 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 CBWD5Q5RIA9 395 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 C1orf220Q5T0J3 134 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 TRIM65Q6PJ69 517 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 FAM43BQ6ZT52 329 aaPredicted RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 RRAGAQ7L523 313 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 WDR49Q8IV35 697 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 HACE1Q8IYU2 909 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 FBXL13Q8NEE6 735 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 SYN2Q92777 582 aaPredicted RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 SPAG5Q96R06 1193 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 TSPAN18Q96SJ8 248 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 POP1Q99575 1024 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 DNAJC7Q99615 494 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 CGRRF1Q99675 332 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 TTYH3Q9C0H2 523 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 INTS2Q9H0H0 1204 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 TMX1Q9H3N1 280 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 ASB7Q9H672 318 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 CHST12Q9NRB3 414 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 ABHD10Q9NUJ1 306 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 PIN4Q9Y237 131 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 COQ4Q9Y3A0 265 aa11.15□□□□□ -0.62
USP3-219ENST00000561326 R3HCC1Q9Y3T6 440 aaKnown RBP11.15□□□□□ -0.62
USP3-219ENST00000561326 PDCD11Q14690 1871 aaKnown RBP11.15□□□□□ -0.63
USP3-219ENST00000561326 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms