RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ZSWIM2Q8NEG5 633 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 DHTKD1Q96HY7 919 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 ACAP3Q96P50 834 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 CBWD1Q9BRT8 395 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 SEMA6BQ9H3T3 888 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 UBN1Q9NPG3 1134 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 AGPAT3Q9NRZ7 376 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 PDCD11Q14690 1871 aaKnown RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 PSMA7O14818 248 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CALUO43852 315 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 FAM189A1O60320 539 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 OFD1O75665 1012 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 GJB5O95377 273 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 FGFR1P11362 822 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CCNE1P24864 410 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 TNFSF9P41273 254 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 RABGGTBP53611 331 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CLLU1OSQ5K130 101 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 ANKRD40Q6AI12 368 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 FAM109BQ6ICB4 259 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 KLHL10Q6JEL2 608 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 HELQQ8TDG4 1101 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 NOC3LQ8WTT2 800 aaKnown RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 ZNF689Q96CS4 500 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 SAAL1Q96ER3 474 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CASD1Q96PB1 797 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CCDC94Q9BW85 323 aaPredicted RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 RSAD1Q9HA92 442 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 RNF19AQ9NV58 838 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 CPSF3Q9UKF6 684 aaKnown RBP11.21□□□□□ -0.61
LRRC28-221ENST00000561276 INSL6Q9Y581 213 aa11.21□□□□□ -0.61
LRRC28-221ENST00000561276 GOLGA8IPA6NC78 632 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 TRIM49BA6NDI0 452 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ARL5CA6NH57 179 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GOLGA8JA6NMD2 632 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 KIAA0391O15091 583 aaKnown RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 HOXA2O43364 376 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 TLL1O43897 1013 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 RECQL4O94761 1208 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 CLTAP09496 248 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GATMP50440 423 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 CYP2J2P51589 502 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 AFF1P51825 1210 aaKnown RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 PMS1P54277 932 aaKnown RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 YARSP54577 528 aaKnown RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 HTRA4P83105 476 aaPredicted RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ADAM9Q13443 819 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 KYAT1Q16773 422 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 SLC10A6Q3KNW5 377 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ZBTB41Q5SVQ8 909 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GLB1LQ6UWU2 654 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ALKAL1Q6UXT8 129 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 C12orf56Q8IXR9 622 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ABI1Q8IZP0 508 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GPD1LQ8N335 351 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 XXYLT1Q8NBI6 393 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 NELFBQ8WX92 580 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 P2RX5Q93086 422 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 ZFP42Q96MM3 310 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GAD1Q99259 594 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 RAD9AQ99638 391 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 CXCL16Q9H2A7 254 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
LRRC28-221ENST00000561276 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 MIOSQ9NXC5 875 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 HSPBP1Q9NZL4 362 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 GIT1Q9Y2X7 761 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 NLRC5Q86WI3 1866 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 KIAA1671Q9BY89 1806 aa11.2□□□□□ -0.62
LRRC28-221ENST00000561276 RALGAPA2Q2PPJ7 1873 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 A0A1W2PPC1 479 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 SYCE3A1L190 88 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 ZNF233A6NK53 670 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TBKBP1A7MCY6 615 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TULP1O00294 542 aaPredicted RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 EXTL3O43909 919 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 EXOC3O60645 756 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 NR3C1P04150 777 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 MYOGP15173 224 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 RPL13P26373 211 aaKnown RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 MLH1P40692 756 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 STX17P56962 302 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 LRRC63Q05C16 580 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 MYBPC2Q14324 1141 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 NFIL3Q16649 462 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 EDRF1Q3B7T1 1238 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 PAN2Q504Q3 1202 aaKnown RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 NOMO2Q5JPE7 1267 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 SLC9A9Q8IVB4 645 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 GSTCDQ8NEC7 633 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TMEM174Q8WUU8 243 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms