RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ALKAL1Q6UXT8 129 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 IQUBQ8NA54 791 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 URGCPQ8TCY9 931 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
TPM1-230ENST00000561266 C7orf25Q9BPX7 421 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 TNMDQ9H2S6 317 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 UBN1Q9NPG3 1134 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 AAASQ9NRG9 546 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 PANK4Q9NVE7 773 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 SPG21Q9NZD8 308 aa15.24■□□□□ 0.03
TPM1-230ENST00000561266 TCF20Q9UGU0 1960 aaKnown RBP15.24■□□□□ 0.03
TPM1-230ENST00000561266 NRP1O14786 923 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 PIGRP01833 764 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 HOXD13P35453 343 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 TNFSF9P41273 254 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 GRM5P41594 1212 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 TFF2Q03403 129 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 HYAL1Q12794 435 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 STRN3Q13033 797 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 HERC4Q5GLZ8 1057 aaPredicted RBP15.23■□□□□ 0.03
TPM1-230ENST00000561266 GLRA4Q5JXX5 417 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 CNNM4Q6P4Q7 775 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ZPBP2Q6X784 338 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 TAS1R1Q7RTX1 841 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 IGSF21Q96ID5 467 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
TPM1-230ENST00000561266 SCAND2PQ9GZW5 306 aaPredicted RBP15.23■□□□□ 0.03
TPM1-230ENST00000561266 LMAN2LQ9H0V9 348 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ST6GALNAC4Q9H4F1 302 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ANKFY1Q9P2R3 1169 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 ATP6V1DQ9Y5K8 247 aa15.23■□□□□ 0.03
TPM1-230ENST00000561266 VWA8A3KMH1 1905 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 LINC01565O15544 149 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 TOM1L1O75674 476 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 EFEMP2O95967 443 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 MCF2P10911 925 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 RBM10P98175 930 aaKnown RBP15.22■□□□□ 0.03
TPM1-230ENST00000561266 SOX4Q06945 474 aaPredicted RBP15.22■□□□□ 0.03
TPM1-230ENST00000561266 MCL1Q07820 350 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 EHHADHQ08426 723 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 PTPROQ16827 1216 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 SLC10A6Q3KNW5 377 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 XKR4Q5GH76 650 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 MAP4K3Q8IVH8 894 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 AUTS2Q8WXX7 1259 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 PAGE5Q96GU1 130 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 TCHPQ9BT92 498 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 CUEDC2Q9H467 287 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
TPM1-230ENST00000561266 MRPL44Q9H9J2 332 aaKnown RBP15.22■□□□□ 0.03
TPM1-230ENST00000561266 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 KCNG1Q9UIX4 513 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 FAN1Q9Y2M0 1017 aa15.22■□□□□ 0.03
TPM1-230ENST00000561266 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
TPM1-230ENST00000561266 A0A1W2PQ27 194 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 A0A1W2PQ64 194 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 A0A1W2PQD8 194 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 PER2O15055 1255 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 KLRC4O43908 158 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 PRPF6O94906 941 aaKnown RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 SLFN14P0C7P3 912 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 GAP43P17677 238 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 ADSSP30520 456 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 OR1G1P47890 313 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 ALDH7A1P49419 539 aaKnown RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 LIG4P49917 911 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 ASIC1P78348 528 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 DLX2Q07687 328 aaPredicted RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 GRIK3Q13003 919 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 NOLC1Q14978 699 aaKnown RBP eCLIP15.21■□□□□ 0.03
TPM1-230ENST00000561266 SKIV2LQ15477 1246 aaKnown RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 PLPP4Q5VZY2 271 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 CD300LGQ6UXG3 332 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 RBM23Q86U06 439 aaKnown RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 BICD1Q96G01 975 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 SNX27Q96L92 541 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 PPP1R10Q96QC0 940 aaKnown RBP15.21■□□□□ 0.03
TPM1-230ENST00000561266 TMEM175Q9BSA9 504 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 TLR9Q9NR96 1032 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 OLFML3Q9NRN5 406 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 SEL1LQ9UBV2 794 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
TPM1-230ENST00000561266 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.2■□□□□ 0.02
TPM1-230ENST00000561266 A0A0B4J269 797 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 SMIM28A0A1B0GU29 152 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 CASTOR2A6NHX0 329 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 H0YCG3 227 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 CLDN3O15551 220 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 GCNT3O95395 438 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 ALDH2P05091 517 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 LTBRP36941 435 aa15.2■□□□□ 0.02
TPM1-230ENST00000561266 UBE3AQ05086 875 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms