RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	SPPL3	Q8TCT6	385 aa		28.21	■■■□□ 2.11
TCF12-222	ENST00000561152	KLK14	Q9P0G3	267 aa		28.21	■■■□□ 2.11
TCF12-222	ENST00000561152	TBC1D7	Q9P0N9	293 aa		28.21	■■■□□ 2.11
TCF12-222	ENST00000561152	LZTS1	Q9Y250	596 aa		28.21	■■■□□ 2.11
TCF12-222	ENST00000561152	ABLIM1	O14639	778 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	NR1I2	O75469	434 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	MYL1	P05976	194 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	MCL1	Q07820	350 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	KYAT1	Q16773	422 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	ZNF280B	Q86YH2	543 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	SLC39A11	Q8N1S5	342 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	POF1B	Q8WVV4	589 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	CCDC34	Q96HJ3	373 aa		28.2	■■■□□ 2.1
TCF12-222	ENST00000561152	PLXNA4	Q9HCM2	1894 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	PPP1R37	O75864	691 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	ALDH2	P05091	517 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	HARS	P12081	509 aa	Known RBP	28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	PBX3	P40426	434 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	UNC13D	Q70J99	1090 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	TMEM169	Q96HH4	297 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	ZBTB45	Q96K62	511 aa	Predicted RBP	28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	ACAP3	Q96P50	834 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	ACCS	Q96QU6	501 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	STRA6	Q9BX79	667 aa		28.19	■■■□□ 2.1
TCF12-222	ENST00000561152	PVALEF	A0A1B0GWK0	134 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	DDHD2	O94830	711 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	GALT	P07902	379 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	CCDC85B	Q15834	202 aa	Predicted RBP	28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	L1TD1	Q5T7N2	865 aa	Known RBP	28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	SLFN12L	Q6IEE8	588 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	GSTCD	Q8NEC7	633 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	PPM1E	Q8WY54	764 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	PAGE5	Q96GU1	130 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	BLZF1	Q9H2G9	400 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	MIOS	Q9NXC5	875 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	DNAJB4	Q9UDY4	337 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	STK39	Q9UEW8	545 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	FAN1	Q9Y2M0	1017 aa		28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	PRRC2B	Q5JSZ5	2229 aa	Known RBP	28.18	■■■□□ 2.1
TCF12-222	ENST00000561152	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	TH	P07101	528 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	OSTN	P61366	133 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	DSC1	Q08554	894 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	COLGALT2	Q8IYK4	626 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	CEP120	Q8N960	986 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	NSUN3	Q9H649	340 aa	Known RBP	28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	TLR9	Q9NR96	1032 aa		28.17	■■■□□ 2.1
TCF12-222	ENST00000561152	NT5C1B-RDH14	C9J2C7	533 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	SLC11A1	P49279	550 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	CUL4B	Q13620	913 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	PDE12	Q6L8Q7	609 aa	Known RBP	28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	PPP2R3C	Q969Q6	453 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	GOLPH3L	Q9H4A5	285 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	TMEM206	Q9H813	350 aa		28.16	■■■□□ 2.1
TCF12-222	ENST00000561152	ZNF202	O95125	648 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	MYB	P10242	640 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	OR1G1	P47890	313 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	BMS1	Q14692	1282 aa	Known RBP	28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	FAM26F	Q5R3K3	315 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	KANK3	Q6NY19	840 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	GRAMD1C	Q8IYS0	662 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	SYCP3	Q8IZU3	236 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	IGSF21	Q96ID5	467 aa		28.15	■■■□□ 2.1
TCF12-222	ENST00000561152	CIT	O14578	2027 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152		A0A0B4J269	797 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	PTGES	O14684	152 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	NRP1	O14786	923 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	OGT	O15294	1046 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	CLTA	P09496	248 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	DNAJB1	P25685	340 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	CASP5	P51878	434 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	TUSC3	Q13454	348 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	POSTN	Q15063	836 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	KRBA2	Q6ZNG9	492 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	MSTO1	Q9BUK6	570 aa		28.14	■■■□□ 2.1
TCF12-222	ENST00000561152	EIF3D	O15371	548 aa	Known RBP eCLIP	28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	B4GALT3	O60512	393 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	CASP1	P29466	404 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	CAMK1	Q14012	370 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	SKIV2L	Q15477	1246 aa	Known RBP	28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	SLC39A4	Q6P5W5	647 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	MICAL1	Q8TDZ2	1067 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	SNX27	Q96L92	541 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	COLEC11	Q9BWP8	271 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	STYXL1	Q9Y6J8	313 aa		28.13	■■■□□ 2.09
TCF12-222	ENST00000561152	CSPG5	O95196	566 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	EHHADH	Q08426	723 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	XKR4	Q5GH76	650 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	ALKAL1	Q6UXT8	129 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	DDX53	Q86TM3	631 aa	Known RBP	28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	CCDC47	Q96A33	483 aa	Known RBP	28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	HAPLN2	Q9GZV7	340 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	PLEKHA5	Q9HAU0	1116 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	NGRN	Q9NPE2	291 aa	Known RBP	28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	EXOC1	Q9NV70	894 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	SLC38A7	Q9NVC3	462 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	UBE4B	O95155	1302 aa		28.12	■■■□□ 2.09
TCF12-222	ENST00000561152	COL6A3	P12111	3177 aa		28.11	■■■□□ 2.09
TCF12-222	ENST00000561152	ANKRD63	C9JTQ0	380 aa		28.11	■■■□□ 2.09
TCF12-222	ENST00000561152	FAM160A1	Q05DH4	1040 aa		28.11	■■■□□ 2.09

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms