RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 UNC45BQ8IWX7 931 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NRSN1Q8IZ57 195 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ADGRG2Q8IZP9 1017 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MPP5Q8N3R9 675 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TMEM57Q8N5G2 664 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CCDC155Q8N6L0 562 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NKAIN3Q8N8D7 197 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 DAGLBQ8NCG7 672 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZMIZ2Q8NF64 920 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CEP70Q8NHQ1 597 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 IL31RAQ8NI17 732 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 FAM71BQ8TC56 605 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CALML6Q8TD86 181 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ADAMTS15Q8TE58 950 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 IPO4Q8TEX9 1081 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 WHAMMQ8TF30 809 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PPP1R13LQ8WUF5 828 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ST8SIA4Q92187 359 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 DPF2Q92785 391 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NELL1Q92832 810 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZNF653Q96CK0 615 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZNF837Q96EG3 531 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 FEM1CQ96JP0 617 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CLPTM1LQ96KA5 538 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZFP42Q96MM3 310 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PTCHD1Q96NR3 888 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GBP5Q96PP8 586 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 SPAG5Q96R06 1193 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 UHRF1Q96T88 793 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 FSD1Q9BTV5 496 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MYL10Q9BUA6 226 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MAK16Q9BXY0 300 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 SEZ6LQ9BYH1 1024 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TXLNGYQ9BZA5 131 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GPR63Q9BZJ6 419 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CD244Q9BZW8 370 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NRSN2Q9GZP1 204 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PAIP1Q9H074 479 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 DHX36Q9H2U1 1008 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 RABEP2Q9H5N1 569 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CXorf56Q9H5V9 222 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GREM2Q9H772 168 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 VEZTQ9HBM0 779 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 SMURF1Q9HCE7 757 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 EPB41L4AQ9HCS5 686 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 ABCF3Q9NUQ8 709 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TBC1D23Q9NUY8 699 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZSCAN32Q9NX65 697 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 GGA3Q9NZ52 723 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MARCH2Q9P0N8 246 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CPNE7Q9UBL6 633 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 ZNF212Q9UDV6 495 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 CHORDC1Q9UHD1 332 aaPredicted RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 HERC5Q9UII4 1024 aaKnown RBP2.28□□□□□ -2.04
RTF1-207ENST00000561076 MOSPD1Q9UJG1 213 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 DNMT3LQ9UJW3 386 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MKL2Q9ULH7 1088 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 TBX20Q9UMR3 447 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 SUFUQ9UMX1 484 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PCDHA6Q9UN73 950 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 MINPP1Q9UNW1 487 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 LIMCH1Q9UPQ0 1083 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PCDHGC5Q9Y5F6 944 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 PCDHA13Q9Y5I0 950 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 NUMBLQ9Y6R0 609 aa2.28□□□□□ -2.04
RTF1-207ENST00000561076 USP19O94966 1318 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 A0A1W2PPC4 97 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 hCG_1807616A0A1W2PRN6 198 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PRSS38A1L453 326 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CCDC78A2IDD5 438 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 AQP12BA6NM10 295 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 C22orf46C9J442 243 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 IPO5O00410 1097 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 MAN2B1O00754 1011 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 C2CD2LO14523 706 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 DVL2O14641 736 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MTSS1O43312 755 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 BUB1BO60566 1050 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 TSPAN3O60637 253 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 HNRNPCL1O60812 293 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 COBLO75128 1261 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MAFO75444 373 aaPredicted RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 B3GALNT1O75752 331 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 ENDOD1O94919 500 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SLU7O95391 586 aaKnown RBP2.27□□□□□ -2.05
RTF1-207ENST00000561076 ADAMTS2O95450 1211 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 SCGB1D1O95968 90 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 FUCA1P04066 466 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 GNAI3P08754 354 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CKMT1AP12532 417 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 RAC2P15153 192 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 FOSL1P15407 271 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 FGFR2P21802 821 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 AMPD1P23109 780 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PSMA3P25788 255 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MC4RP32245 332 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 PGM1P36871 562 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 MAP2K3P46734 347 aa2.27□□□□□ -2.05
RTF1-207ENST00000561076 CARSP49589 748 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms