RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 SEC24CP53992 1094 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 HMGCS2P54868 508 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 CDR2Q01850 454 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 TUBB8Q3ZCM7 444 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 RDM1Q8NG50 284 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 TMC2Q8TDI7 906 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 FAM213AQ9BRX8 229 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 GINM1Q9NU53 330 aa15.7■□□□□ 0.1
CRTC3-210ENST00000560927 ZNF214Q9UL59 606 aaPredicted RBP15.7■□□□□ 0.1
CRTC3-210ENST00000560927 PTPRAP18433 802 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 PLTPP55058 493 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 DHX34Q14147 1143 aaKnown RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 LMBRD2Q68DH5 695 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 ZDHHC24Q6UX98 284 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 FBXO25Q8TCJ0 367 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 ATP6V0A1Q93050 837 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 MAGOHBQ96A72 148 aaKnown RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 PDLIM7Q9NR12 457 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 SEPT9Q9UHD8 586 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 DOCK5Q9H7D0 1870 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 COL11A1P12107 1806 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 FAM187AA6NFU0 413 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 SPOPO43791 374 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 CTNNA2P26232 953 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 PRKCEQ02156 737 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 TMEM132BQ14DG7 1078 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 LLGL1Q15334 1064 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 PPP2R5EQ16537 467 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 PTGISQ16647 500 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 XRRA1Q6P2D8 792 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 POTEAQ6S8J7 498 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 SCYL3Q8IZE3 742 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 GPD1LQ8N335 351 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 ZNF280CQ8ND82 737 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 ZNF516Q92618 1163 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 WRNIP1Q96S55 665 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 EPN3Q9H201 632 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 EPB41L4BQ9H329 900 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 JPH1Q9HDC5 661 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 GRHL1Q9NZI5 618 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 RGS17Q9UGC6 210 aaPredicted RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 GTF3C4Q9UKN8 822 aa15.69■□□□□ 0.1
CRTC3-210ENST00000560927 ZNFX1Q9P2E3 1918 aaKnown RBP15.69■□□□□ 0.1
CRTC3-210ENST00000560927 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 KIAA1217Q5T5P2 1943 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 WNT7BP56706 349 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 DALRD3Q5D0E6 543 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 NSUN6Q8TEA1 469 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 BICD1Q96G01 975 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 WNT8AQ9H1J5 351 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 CYP26B1Q9NR63 512 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 CNOT8Q9UFF9 292 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 CNOT7Q9UIV1 285 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 NOVA2Q9UNW9 492 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 GJA3Q9Y6H8 435 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 FAM169AQ9Y6X4 670 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 RLFQ13129 1914 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 DGAT1O75907 488 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 PSAPP07602 524 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 FDX1P10109 184 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 KRT5P13647 590 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 CHRNA3P32297 505 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 ACTR2P61160 394 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 UBAP2Q5T6F2 1119 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 SEL1L2Q5TEA6 688 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 CCDC137Q6PK04 289 aaKnown RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 RUFY4Q6ZNE9 571 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 TSPYL1Q9H0U9 437 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 POLR3FQ9H1D9 316 aaPredicted RBP15.68■□□□□ 0.1
CRTC3-210ENST00000560927 SLC9A2Q9UBY0 812 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 SLC12A6Q9UHW9 1150 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 PNMA2Q9UL42 364 aa15.68■□□□□ 0.1
CRTC3-210ENST00000560927 MAFGO15525 162 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 SHBGP04278 402 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 TMOD1P28289 359 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 DSG3P32926 999 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 RPL21P46778 160 aaKnown RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 BIRC3Q13489 604 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 CLUL1Q15846 466 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 KRT71Q3SY84 523 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 ACAD10Q6JQN1 1059 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 CYFIP1Q7L576 1253 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 ZNF526Q8TF50 670 aaPredicted RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 A1CFQ9NQ94 594 aaKnown RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 CYP39A1Q9NYL5 469 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 PCYOX1Q9UHG3 505 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 PCDHA3Q9Y5H8 950 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 GTF2H1P32780 548 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 MAGEA9P43362 315 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 SP2Q02086 613 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 SIX1Q15475 284 aaPredicted RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 MTERF2Q49AM1 385 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 ABHD15Q6UXT9 468 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 PHLDB2Q86SQ0 1253 aa15.67■□□□□ 0.1
CRTC3-210ENST00000560927 SLC13A5Q86YT5 568 aaPredicted RBP15.67■□□□□ 0.1
CRTC3-210ENST00000560927 ARHGAP28Q9P2N2 729 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms