RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 POU5F1Q01860 360 aaKnown RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 APBA1Q02410 837 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 MGAT3Q09327 533 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 TMEM62Q0P6H9 643 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 HSP90AA2PQ14568 343 aaPredicted RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNX1-212ENST00000560861 MEA1Q16626 185 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 ZNF568Q3ZCX4 644 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 E4F1Q66K89 784 aaPredicted RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 GBP6Q6ZN66 633 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 CCDC112Q8NEF3 446 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 CPLX3Q8WVH0 158 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 ZNF516Q92618 1163 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 OSMRQ99650 979 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 NAA15Q9BXJ9 866 aaKnown RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 MMRN2Q9H8L6 949 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 FAM207AQ9NSI2 230 aaPredicted RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 ABHD10Q9NUJ1 306 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 AGPAT5Q9NUQ2 364 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 CEP72Q9P209 647 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 FBXL5Q9UKA1 691 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 PTPRJQ12913 1337 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 ESPNB1AK53 854 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 RPLP2P05387 115 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 SKILP12757 684 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 ACTN1P12814 892 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 TRIM21P19474 475 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 FGFR4P22455 802 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 EIF4BP23588 611 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 GCLMP48507 274 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 MYL7Q01449 175 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 ITGA7Q13683 1181 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 MTFR1Q15390 333 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 KLHDC7AQ5VTJ3 777 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 PDXDC1Q6P996 788 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 TRIM65Q6PJ69 517 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 WDR59Q6PJI9 974 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 CDR2LQ86X02 465 aaPredicted RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 CEP120Q8N960 986 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 ARRDC4Q8NCT1 418 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 EHBP1Q8NDI1 1231 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 NEK11Q8NG66 645 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 OR8K1Q8NGG5 319 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 CPB2Q96IY4 423 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 CGRRF1Q99675 332 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 CELF4Q9BZC1 486 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 SENP6Q9GZR1 1112 aaPredicted RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 MCOLN1Q9GZU1 580 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 INTS2Q9H0H0 1204 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 PDE11AQ9HCR9 933 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 RBAKQ9NYW8 714 aaPredicted RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 GCNT4Q9P109 453 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 AJAP1Q9UKB5 411 aaPredicted RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 OGDHLQ9ULD0 1010 aa12.26□□□□□ -0.45
SNX1-212ENST00000560861 LUC7L2Q9Y383 392 aaKnown RBP12.26□□□□□ -0.45
SNX1-212ENST00000560861 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 STX10O60499 249 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 LRRN2O75325 713 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 CHRNA1P02708 482 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 C4BPAP04003 597 aaKnown RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 MXI1P50539 228 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 CDK17Q00537 523 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 PTK7Q13308 1070 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 ENOX2Q16206 610 aaKnown RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 ZACNQ401N2 412 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 SEZ6Q53EL9 994 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 FAM26DQ5JW98 314 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 SV2AQ7L0J3 742 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 TMEM192Q8IY95 271 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 SEMA4DQ92854 862 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 CCDC127Q96BQ5 260 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 FAM84AQ96KN4 292 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 PCMTD1Q96MG8 357 aaPredicted RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 POP1Q99575 1024 aaKnown RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 BAG1Q99933 345 aaPredicted RBP12.25□□□□□ -0.45
SNX1-212ENST00000560861 KCND1Q9NSA2 647 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 DAAM1Q9Y4D1 1078 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 TRPV2Q9Y5S1 764 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 FHOD1Q9Y613 1164 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 CDY2AQ9Y6F7 541 aa12.25□□□□□ -0.45
SNX1-212ENST00000560861 DNM1LO00429 736 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 TPM1P09493 284 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 CLTAP09496 248 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 HARSP12081 509 aaKnown RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 CCL5P13501 91 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 UCHL3P15374 230 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 AXLP30530 894 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 MNX1P50219 401 aaPredicted RBP12.24□□□□□ -0.45
SNX1-212ENST00000560861 CDK7P50613 346 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 JAM2P57087 298 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 PTGISQ16647 500 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 KYAT1Q16773 422 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
SNX1-212ENST00000560861 FAM47CQ5HY64 1035 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms