RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 ADAMTS3O15072 1205 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 NR1I2O75469 434 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 POMCP01189 267 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 SSBP05455 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
APH1B-209ENST00000560716 PPP2R5DQ14738 602 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 RTN1Q16799 776 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 PRR16Q569H4 304 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
APH1B-209ENST00000560716 PDXDC1Q6P996 788 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 ZNF852Q6ZMS4 543 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 SYNE3Q6ZMZ3 975 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 RHPN2Q8IUC4 686 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 NPAS3Q8IXF0 933 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 FAM177A1Q8N128 213 aaPredicted RBP8.33□□□□□ -1.08
APH1B-209ENST00000560716 FBXL16Q8N461 479 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
APH1B-209ENST00000560716 BICD2Q8TD16 824 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 NUP210Q8TEM1 1887 aaPredicted RBP8.33□□□□□ -1.08
APH1B-209ENST00000560716 ELSPBP1Q96BH3 223 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 ZNF668Q96K58 619 aaPredicted RBP8.33□□□□□ -1.08
APH1B-209ENST00000560716 SCLT1Q96NL6 688 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 CLSTN3Q9BQT9 956 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 PHF20Q9BVI0 1012 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 TEKT3Q9BXF9 490 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 NFKBIZQ9BYH8 718 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 GBP3Q9H0R5 595 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 MINDY3Q9H8M7 445 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 C6orf50Q9HD87 102 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 MIOSQ9NXC5 875 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 ADAM28Q9UKQ2 775 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 ANGPTL2Q9UKU9 493 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 SAMM50Q9Y512 469 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 IPPQ9Y573 584 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 COL4A3BPQ9Y5P4 624 aa8.33□□□□□ -1.08
APH1B-209ENST00000560716 ATRXP46100 2492 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 ZZEF1O43149 2961 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 ZBTB43O43298 467 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 PRPF3O43395 683 aaKnown RBP8.32□□□□□ -1.08
APH1B-209ENST00000560716 DKC1O60832 514 aaKnown RBP eCLIP8.32□□□□□ -1.08
APH1B-209ENST00000560716 GAS7O60861 476 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 PROS1P07225 676 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 ITGA4P13612 1032 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 OR1G1P47890 313 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 CCR3P51677 355 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 GRIK3Q13003 919 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 MTAPQ13126 283 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 RAB33AQ14088 237 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 UBXN2BQ14CS0 331 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 LRCH2Q5VUJ6 765 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 CREB3L3Q68CJ9 461 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 GRASPQ7Z6J2 395 aaPredicted RBP8.32□□□□□ -1.08
APH1B-209ENST00000560716 PALB2Q86YC2 1186 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 KSR1Q8IVT5 923 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 LNX1Q8TBB1 728 aaPredicted RBP8.32□□□□□ -1.08
APH1B-209ENST00000560716 MSANTD3Q96H12 275 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 C22orf23Q9BZE7 217 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 SEMA4GQ9NTN9 838 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
APH1B-209ENST00000560716 BRPF3Q9ULD4 1205 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 USP18Q9UMW8 372 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 ASPMQ8IZT6 3477 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 FRYQ5TBA9 3013 aa8.32□□□□□ -1.08
APH1B-209ENST00000560716 SF3B1O75533 1304 aaKnown RBP eCLIP8.31□□□□□ -1.08
APH1B-209ENST00000560716 CCDC196A0A1B0GTZ2 297 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 ARHGEF37A1IGU5 675 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 TMEM189-UBE2V1I3L0A0 370 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 TSPAN1O60635 241 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 XYLBO75191 536 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 SPATA31D3P0C874 917 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 CDC27P30260 824 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 RFC5P40937 340 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 PTENP60484 403 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 PSMC5P62195 406 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 PPP2R5CQ13362 524 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 AMHR2Q16671 573 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 LONRF3Q496Y0 759 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 RTP2Q5QGT7 225 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 NOTUMQ6P988 496 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 C1orf228Q6PIY5 440 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 SPATA31D4Q6ZUB0 917 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 TPRG1Q6ZUI0 275 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 MIER3Q7Z3K6 550 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 MAP4K3Q8IVH8 894 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 ITFG1Q8TB96 612 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 ETNPPLQ8TBG4 499 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 TCP11Q8WWU5 503 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 PRPF31Q8WWY3 499 aaKnown RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 PSPC1Q8WXF1 523 aaKnown RBP8.31□□□□□ -1.08
APH1B-209ENST00000560716 LOXL4Q96JB6 756 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 NLRP4Q96MN2 994 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 GAD1Q99259 594 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 CSRNP2Q9H175 543 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 TRPV4Q9HBA0 871 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 SH3GLB2Q9NR46 395 aa8.31□□□□□ -1.08
APH1B-209ENST00000560716 RAB23Q9ULC3 237 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms