RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 CLUHO75153 1309 aa11.23□□□□□ -0.61
SNRPA1-212ENST00000560496 FRYLO94915 3013 aa11.23□□□□□ -0.61
SNRPA1-212ENST00000560496 COL4A2P08572 1712 aa11.23□□□□□ -0.61
SNRPA1-212ENST00000560496 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
SNRPA1-212ENST00000560496 ARHGEF35A5YM69 484 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 N4BP3O15049 544 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 SF3B1O75533 1304 aaKnown RBP eCLIP11.22□□□□□ -0.617e-7■■■■■ 63.2
SNRPA1-212ENST00000560496 RFPL2O75678 378 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 RECQL4O94761 1208 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 KIF4AO95239 1232 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 CYP11B2P19099 503 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 MUTP22033 750 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 AVPR2P30518 371 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 HMGN5P82970 282 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 NCBP1Q09161 790 aaKnown RBP11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 PADI6Q6TGC4 694 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 ZBTB8OSQ8IWT0 167 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 PLCD3Q8N3E9 789 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 HASPINQ8TF76 798 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 NACC1Q96RE7 527 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 PRRX2Q99811 253 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 PARP2Q9UGN5 583 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 DUSP12Q9UNI6 340 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 SSX2IPQ9Y2D8 614 aa11.22□□□□□ -0.61
SNRPA1-212ENST00000560496 CACNA1HO95180 2353 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 PHLPP2Q6ZVD8 1323 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 CASTOR2A6NHX0 329 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 TGM5O43548 720 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 U2AF2P26368 475 aaKnown RBP eCLIP11.21□□□□□ -0.612e-7■■■□□ 14.8
SNRPA1-212ENST00000560496 TRAPPC10P48553 1259 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 TOB1P50616 345 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 TUSC3Q13454 348 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 HSP90AA2PQ14568 343 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 GPR65Q8IYL9 337 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 DAW1Q8N136 415 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 IGSF22Q8N9C0 903 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 WDR6Q9NNW5 1121 aaKnown RBP11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 FAM86C1Q9NVL1 165 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 SNTG2Q9NY99 539 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 FNIP2Q9P278 1114 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 FBXW11Q9UKB1 542 aa11.21□□□□□ -0.61
SNRPA1-212ENST00000560496 MIA3Q5JRA6 1907 aa11.21□□□□□ -0.62
SNRPA1-212ENST00000560496 DMXL1Q9Y485 3027 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 CCDC195A0A1B0GUA6 201 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 PP2D1A8MPX8 630 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ACKR2O00590 384 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 C1RP00736 705 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 MYBP10242 640 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 RPL17P18621 184 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 CCT6AP40227 531 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 RBM25P49756 843 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 MAPK7Q13164 816 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 PRPF4BQ13523 1007 aaKnown RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 MAPK6Q16659 721 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 USP41Q3LFD5 358 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 LILRA6Q6PI73 481 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 PRSS55Q6UWB4 352 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 OTOP3Q7RTS5 596 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 TAS1R3Q7RTX0 852 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 GLYCTKQ8IVS8 523 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ERMNQ8TAM6 284 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 DEPTORQ8TB45 409 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 SNX29Q8TEQ0 813 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 HDAC7Q8WUI4 952 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 RIN2Q8WYP3 895 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 PIK3R5Q8WYR1 880 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ZSCAN31Q96LW9 406 aaPredicted RBP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 MYADMQ96S97 322 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 COLEC11Q9BWP8 271 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 BHMT2Q9H2M3 363 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 POLD4Q9HCU8 107 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ZDHHC7Q9NXF8 308 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 PCDHB6Q9Y5E3 794 aa11.2□□□□□ -0.62
SNRPA1-212ENST00000560496 ANK1P16157 1881 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 TMEM189-UBE2V1I3L0A0 370 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 NARSO43776 548 aaKnown RBP11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 NR1I2O75469 434 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 SPATA31D3P0C874 917 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 IGFBP6P24592 240 aaPredicted RBP11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 CREMQ03060 361 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 PPP2R5AQ15172 486 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 IL17AQ16552 155 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 DCAF4L1Q3SXM0 396 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 NT5DC1Q5TFE4 455 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 CYP26C1Q6V0L0 522 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 SPATA31D4Q6ZUB0 917 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 KCNK18Q7Z418 384 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 PALB2Q86YC2 1186 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 CEP120Q8N960 986 aa11.19□□□□□ -0.62
SNRPA1-212ENST00000560496 FAM184AQ8NB25 1140 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms