RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 FAM193BQ96PV7 902 aaPredicted RBP15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 CWH43Q9H720 699 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 PLEKHA5Q9HAU0 1116 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 GRPEL1Q9HAV7 217 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 RMND1Q9NWS8 449 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 ANKFY1Q9P2R3 1169 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 PARP2Q9UGN5 583 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
PKNOX1-209ENST00000560448 A0A0B4J269 797 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 SYCE3A1L190 88 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 RECQL4O94761 1208 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 LDHAP00338 332 aaKnown RBP15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 CLTAP09496 248 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 GARTP22102 1010 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 MLH1P40692 756 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 MATR3P43243 847 aaKnown RBP eCLIP15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 DPYDQ12882 1025 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 ZC2HC1CQ53FD0 456 aaPredicted RBP15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 CDR2LQ86X02 465 aaPredicted RBP15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 CD302Q8IX05 232 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 ZNF507Q8TCN5 953 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 ZNF558Q96NG5 402 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 GSDMAQ96QA5 445 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 CDX2Q99626 313 aaPredicted RBP15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 C17orf80Q9BSJ5 609 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 SLC38A7Q9NVC3 462 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 HES2Q9Y543 173 aa15.27■□□□□ 0.04
PKNOX1-209ENST00000560448 OGTO15294 1046 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 KLRC4O43908 158 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 RHOBTB3O94955 611 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 ARHGEF15O94989 841 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 SMC2O95347 1197 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 RPN1P04843 607 aaKnown RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GATMP50440 423 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 PLCB3Q01970 1234 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 KRT17Q04695 432 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 XKR4Q5GH76 650 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 PDE12Q6L8Q7 609 aaKnown RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 KCNT2Q6UVM3 1135 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 Q7L0L9 218 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 EPM2AIP1Q7L775 607 aaPredicted RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 COLGALT1Q8NBJ5 622 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GOLGA5Q8TBA6 731 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GUCD1Q96NT3 240 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GAD1Q99259 594 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GBP3Q9H0R5 595 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 SNTG2Q9NY99 539 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 PUF60Q9UHX1 559 aaKnown RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 INPP5FQ9Y2H2 1132 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 STXBP5LQ9Y2K9 1186 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 MEIS3P2A8K0S8 358 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 LETM1O95202 739 aaPredicted RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 ALDH2P05091 517 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 THP07101 528 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 AKAP5P24588 427 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 DSC1Q08554 894 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GPM6BQ13491 265 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 BMS1Q14692 1282 aaKnown RBP15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 ALKAL1Q6UXT8 129 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 TMEM174Q8WUU8 243 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 MSTO1Q9BUK6 570 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 APOL6Q9BWW8 343 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 RNF39Q9H2S5 420 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 PRDM12Q9H4Q4 367 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 SPG21Q9NZD8 308 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 TBC1D7Q9P0N9 293 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 CNTN3Q9P232 1028 aa15.26■□□□□ 0.03
PKNOX1-209ENST00000560448 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 MYBP10242 640 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 KCNE1P15382 129 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 FOSL2P15408 326 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 CASP5P51878 434 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 BCAR1P56945 870 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 TUSC3Q13454 348 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 HS2ST1Q7LGA3 356 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 ZBTB33Q86T24 672 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 THNSL1Q8IYQ7 743 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 GRAMD1CQ8IYS0 662 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 SPATA20Q8TB22 786 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 POMGNT1Q8WZA1 660 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 MRPL38Q96DV4 380 aaKnown RBP15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 SNX27Q96L92 541 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 ZFP42Q96MM3 310 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 FAM161BQ96MY7 647 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 UROC1Q96N76 676 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 NRDE2Q9H7Z3 1164 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 KIAA1586Q9HCI6 787 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 AGO2Q9UKV8 859 aaKnown RBP15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 GDAQ9Y2T3 454 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 KIAA1671Q9BY89 1806 aa15.25■□□□□ 0.03
PKNOX1-209ENST00000560448 TDRD15B5MCY1 1934 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms