RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 BIRC3Q13489 604 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 PTPROQ16827 1216 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 ZNF484Q5JVG2 852 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 TRPV1Q8NER1 839 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 SYN2Q92777 582 aaPredicted RBP11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 KAT2BQ92831 832 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 ARID3AQ99856 593 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 MRPL4Q9BYD3 311 aaKnown RBP11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 NUCKS1Q9H1E3 243 aaKnown RBP11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 TMEM8AQ9HCN3 771 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 RAB20Q9NX57 234 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 CAPN6Q9Y6Q1 641 aa11.77□□□□□ -0.52
SNRPA1-211ENST00000560433 TRIP12Q14669 1992 aaPredicted RBP11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 MAPK13O15264 365 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 SRGAP2O75044 1071 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 HOXC6P09630 235 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 FLT3LGP49771 235 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 NAP1L1P55209 391 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 PTENP60484 403 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 RBM10P98175 930 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 PRKCZQ05513 592 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 PRPF4BQ13523 1007 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 SLC18A3Q16572 532 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 TDRD10Q5VZ19 366 aaKnown RBP11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 GLYCTKQ8IVS8 523 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 FBXL13Q8NEE6 735 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 SLC20A1Q8WUM9 679 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 LMBR1Q8WVP7 490 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 TRIB2Q92519 343 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 KREMEN1Q96MU8 473 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 APBA2Q99767 749 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 CDHR5Q9HBB8 845 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 KCNG1Q9UIX4 513 aa11.77□□□□□ -0.53
SNRPA1-211ENST00000560433 A6NJR5 290 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 TOM1L1O75674 476 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 PGK1P00558 417 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 PIGRP01833 764 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 EFNA5P52803 228 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 ZNF568Q3ZCX4 644 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 ATF7IP2Q5U623 682 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 TAF3Q5VWG9 929 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 SLFN12LQ6IEE8 588 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 CARD6Q9BX69 1037 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 ZCCHC17Q9NP64 241 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 FBXL5Q9UKA1 691 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 SIP14410 1827 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 DDX3XO00571 662 aaKnown RBP eCLIP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 GAS2O43903 313 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 FAM189A1O60320 539 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 LCA5LO95447 670 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 ATP1A1P05023 1023 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 C6orf222P0C671 652 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 SMIM10L2AP0DMW4 78 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 SMIM10L2BP0DMW5 78 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 TFDP1Q14186 410 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 NFRKBQ6P4R8 1299 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 KIAA0319LQ8IZA0 1049 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 LNX1Q8TBB1 728 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 U2AF1L4Q8WU68 220 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 PSMB7Q99436 277 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 FZD8Q9H461 694 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 RNF19AQ9NV58 838 aa11.76□□□□□ -0.53
SNRPA1-211ENST00000560433 CNTNAP2Q9UHC6 1331 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 ACKR2O00590 384 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 ABLIM1O14639 778 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 CYP26A1O43174 497 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 N4BP1O75113 896 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 TRPA1O75762 1119 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 VNN1O95497 513 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 ELNP15502 786 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 TMOD1P28289 359 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 DNA2P51530 1060 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 PSMD6Q15008 389 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 LINC01465Q8N7H1 131 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 SECISBP2LQ93073 1101 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 CAPNS2Q96L46 248 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 EPC1Q9H2F5 836 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 GOLPH3Q9H4A6 298 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 TAS2R14Q9NYV8 317 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 CTAGE9A4FU28 777 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 GPR25O00155 361 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 TREHO43280 583 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 TOMM70O94826 608 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 SGPL1O95470 568 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 C4BPAP04003 597 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 DEFB115Q30KQ5 88 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 ALKBH5Q6P6C2 394 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 ZPBP2Q6X784 338 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 SLC47A2Q86VL8 602 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 EXOC8Q8IYI6 725 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 MSL3Q8N5Y2 521 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms