RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 NPAS3Q8IXF0 933 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 ZNF687Q8N1G0 1237 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 CELF5Q8N6W0 485 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 PSPC1Q8WXF1 523 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 APOL6Q9BWW8 343 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 PLA2G2FQ9BZM2 168 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 DHX33Q9H6R0 707 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 HEBP1Q9NRV9 189 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 CACNG4Q9UBN1 327 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 RAB23Q9ULC3 237 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 POLIQ9UNA4 740 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 ATG2BQ96BY7 2078 aa14.3□□□□□ -0.12
RABGGTA-213ENST00000560127 ADAM12O43184 909 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 PRPF3O43395 683 aaKnown RBP14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 TSPAN1O60635 241 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 LRP3O75074 770 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 RETP07949 1114 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 HOXA9P31269 272 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 POTEHQ6S545 545 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 LNX1Q8TBB1 728 aaPredicted RBP14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 BICD2Q8TD16 824 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 SLC7A3Q8WY07 619 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 CCDC51Q96ER9 411 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 CPB2Q96IY4 423 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 ESYT1Q9BSJ8 1104 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 CSRNP2Q9H175 543 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 CHRDQ9H2X0 955 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 HCFC1R1Q9NWW0 138 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 GIT1Q9Y2X7 761 aa14.29□□□□□ -0.12
RABGGTA-213ENST00000560127 AKAP13Q12802 2813 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 EML1O00423 815 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 GDF9O60383 454 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 XYLBO75191 536 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 TADA2AO75478 443 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 ECI2O75521 394 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 ERLIN2O94905 339 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 TDP2O95551 362 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 POU2F2P09086 479 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 AKAP5P24588 427 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 AXLP30530 894 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 NRLP54845 237 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 NOTUMQ6P988 496 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 MAMSTRQ6ZN01 415 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 PRR23CQ6ZRP0 262 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 FERMT3Q86UX7 667 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 ETNPPLQ8TBG4 499 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 TBCKQ8TEA7 893 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 ING5Q8WYH8 240 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 CEP170P1Q96L14 293 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 PAAF1Q9BRP4 392 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 BMP2KQ9NSY1 1161 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 SEMA4GQ9NTN9 838 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 WRAP73Q9P2S5 460 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 DNMT3BQ9UBC3 853 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 KCNH3Q9ULD8 1083 aa14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 NAP1L2Q9ULW6 460 aaPredicted RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 MRPS17Q9Y2R5 130 aaKnown RBP14.28□□□□□ -0.12
RABGGTA-213ENST00000560127 WDFY3Q8IZQ1 3526 aa14.27□□□□□ -0.12
RABGGTA-213ENST00000560127 NBEAQ8NFP9 2946 aa14.27□□□□□ -0.12
RABGGTA-213ENST00000560127 SF3B1O75533 1304 aaKnown RBP eCLIP14.27□□□□□ -0.128e-6■■■■■ 107
RABGGTA-213ENST00000560127 CYP3A7-CYP3A51PA0A087WV96 503 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 CYP3A7P24462 503 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PMLP29590 882 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PTENP60484 403 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 GRIK3Q13003 919 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 COL9A2Q14055 689 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PSMD5Q16401 504 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 CSRP2Q16527 193 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 ADCK5Q3MIX3 580 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PABPC1LQ4VXU2 614 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PRR23BQ6ZRT6 265 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 HASPINQ8TF76 798 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 TTPALQ9BTX7 342 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 ANO2Q9NQ90 1003 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 KLK14Q9P0G3 267 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 ANGPTL2Q9UKU9 493 aa14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 NDRG2Q9UN36 371 aaKnown RBP14.27□□□□□ -0.13
RABGGTA-213ENST00000560127 EML5Q05BV3 1969 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 CCDC196A0A1B0GTZ2 297 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 ASAP2O43150 1006 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 KCNA4P22459 653 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 RFC5P40937 340 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 EMC2Q15006 297 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 PCBP1Q15365 356 aaKnown RBP eCLIP14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 AMHR2Q16671 573 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 SLC5A9Q2M3M2 681 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 FAM171A1Q5VUB5 890 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 TANGO2Q6ICL3 276 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 EXOC8Q8IYI6 725 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 CCDC148Q8NFR7 591 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 MCRS1Q96EZ8 462 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms