RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 RSPH1Q8WYR4 309 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 TCHPQ9BT92 498 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 PTPRHQ9HD43 1115 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 LARSQ9P2J5 1176 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 ANKFY1Q9P2R3 1169 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 STK17AQ9UEE5 414 aa16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 BARX2Q9UMQ3 279 aaPredicted RBP16.29■□□□□ 0.2
RABGGTA-211ENST00000559850 C2orf71A6NGG8 1288 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 ABLIM1O14639 778 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 CXCL14O95715 111 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 IL9P15248 144 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 NDUFV1P49821 464 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 ZNF131P52739 623 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 SMC1AQ14683 1233 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 DUSP6Q16828 381 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 LEXMQ3ZCV2 418 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 DDX53Q86TM3 631 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 EFHBQ8N7U6 833 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 HAPLN2Q9GZV7 340 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 ZBP1Q9H171 429 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 IKZF4Q9H2S9 585 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 PARVGQ9HBI0 331 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 PLXNA3P51805 1871 aa16.28■□□□□ 0.2
RABGGTA-211ENST00000559850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 CASTOR2A6NHX0 329 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 TRAK2O60296 914 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 CUTAO60888 179 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 BRD1O95696 1058 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 PROZP22891 400 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 GRIK3Q13003 919 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 ZC2HC1CQ53FD0 456 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 AXDND1Q5T1B0 1012 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 PTCRAQ6ISU1 281 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 PDE12Q6L8Q7 609 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 SV2BQ7L1I2 683 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 SFR1Q86XK3 245 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 MRPL43Q8N983 215 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 HASPINQ8TF76 798 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 DDX12PQ92771 950 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 DHX58Q96C10 678 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 BICD1Q96G01 975 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 B3GALT6Q96L58 329 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 FIZ1Q96SL8 496 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 TBC1D7Q9P0N9 293 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 PCDHA7Q9UN72 937 aa16.27■□□□□ 0.2
RABGGTA-211ENST00000559850 C2CD2LO14523 706 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 CTSAP10619 480 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 MCF2P10911 925 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 PDIA4P13667 645 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 IGFBP6P24592 240 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 GRM5P41594 1212 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 MATR3P43243 847 aaKnown RBP eCLIP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 ME1P48163 572 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 NAB2Q15742 525 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 DNAJC19Q96DA6 116 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 UHRF1Q96T88 793 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 APOL5Q9BWW9 433 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 NGRNQ9NPE2 291 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 TBX20Q9UMR3 447 aa16.26■□□□□ 0.19
RABGGTA-211ENST00000559850 ANK1P16157 1881 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 TISP43B9A030 160 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 NCK2O43639 380 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 CLASP2O75122 1294 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 THP07101 528 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 PTPN14Q15678 1187 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 E2F4Q16254 413 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 ZBTB41Q5SVQ8 909 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 APBB1IPQ7Z5R6 666 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 TMEM130Q8N3G9 435 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 KCNG4Q8TDN1 519 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 CCDC94Q9BW85 323 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 COLEC11Q9BWP8 271 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 FGFBP2Q9BYJ0 223 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 KCNG1Q9UIX4 513 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 CD207Q9UJ71 328 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 CFAP45Q9UL16 551 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 VWA8A3KMH1 1905 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 ZMYM2Q9UBW7 1377 aa16.25■□□□□ 0.19
RABGGTA-211ENST00000559850 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 TOM1L1O75674 476 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 KIF4AO95239 1232 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 IDEP14735 1019 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 TNFSF9P41273 254 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 LIG4P49917 911 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 SPAG1Q07617 926 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 TUSC3Q13454 348 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 BECN1Q14457 450 aa16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.19
RABGGTA-211ENST00000559850 SLC39A4Q6P5W5 647 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms