RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PRAMEF14Q5SWL7 426 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 Q6ZPA2 131 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 OR7D4Q8NG98 312 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 TSPEARQ8WU66 669 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 AHCYL2Q96HN2 611 aaKnown RBP5.12□□□□□ -1.59
SPG11-218ENST00000559754 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 ACE2Q9BYF1 805 aaPredicted RBP5.12□□□□□ -1.59
SPG11-218ENST00000559754 ZNF768Q9H5H4 540 aaKnown RBP5.12□□□□□ -1.59
SPG11-218ENST00000559754 GREM2Q9H772 168 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 BCO1Q9HAY6 547 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 AKIP1Q9NQ31 210 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 PRKAB1Q9Y478 270 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 CHST2Q9Y4C5 530 aa5.12□□□□□ -1.59
SPG11-218ENST00000559754 TMEM200CA6NKL6 621 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 LEFTY2O00292 366 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 B3GALT2O43825 422 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 GCP02774 474 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 VIL1P09327 827 aaKnown RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 SNRPA1P09661 255 aaKnown RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 ZSCAN20P17040 1043 aaPredicted RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 ADSLP30566 484 aaPredicted RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 SLC5A3P53794 718 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 SCAND1P57086 179 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 CLRN1P58418 232 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 RNASE9P60153 205 aaKnown RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 MXRA7P84157 204 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 FSTL1Q12841 308 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 ADRM1Q16186 407 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 ANKS6Q68DC2 871 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 PCSK4Q6UW60 755 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 SPATS2Q86XZ4 545 aaKnown RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 ZG16BQ96DA0 208 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 CEP95Q96GE4 821 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 AGAP2Q99490 1192 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 CYP4F11Q9HBI6 524 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 RBM12Q9NTZ6 932 aaKnown RBP5.11□□□□□ -1.59
SPG11-218ENST00000559754 PACSIN3Q9UKS6 424 aa5.11□□□□□ -1.59
SPG11-218ENST00000559754 CENPVL1A0A0U1RR11 272 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 PPFIA2O75334 1257 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 EYA4O95677 639 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 IL2RBP14784 551 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 BMPR1AP36894 532 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 CCT2P78371 535 aaKnown RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 SP140Q13342 867 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 MFSD14BQ5SR56 506 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 MBNL2Q5VZF2 373 aaKnown RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 RNF219Q5W0B1 726 aaPredicted RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 ARMC6Q6NXE6 501 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 ZNF572Q7Z3I7 529 aaPredicted RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 KCNK18Q7Z418 384 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 SYT12Q8IV01 421 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 WDR66Q8TBY9 1149 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 TGFBRAP1Q8WUH2 860 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 UHRF1Q96T88 793 aaPredicted RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 ADI1Q9BV57 179 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 KRTAP17-1Q9BYP8 105 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 REXO4Q9GZR2 422 aaKnown RBP5.1□□□□□ -1.59
SPG11-218ENST00000559754 C14orf119Q9NWQ9 140 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 MOCS1Q9NZB8 636 aa5.1□□□□□ -1.59
SPG11-218ENST00000559754 WASHC2AQ641Q2 1341 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 GPR39O43194 453 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 NCR1O76036 304 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 ENDOD1O94919 500 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 NDUFA10O95299 355 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 AVPR1BP47901 424 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 USP14P54578 494 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 PER3P56645 1201 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 FAM189BP81408 668 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 BEAN1Q3B7T3 259 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 RRP12Q5JTH9 1297 aaKnown RBP5.09□□□□□ -1.59
SPG11-218ENST00000559754 TOR2AQ5JU69 321 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 ATXN7L2Q5T6C5 722 aaPredicted RBP5.09□□□□□ -1.59
SPG11-218ENST00000559754 ARHGEF19Q8IW93 802 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 CMIPQ8IY22 773 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 DRC7Q8IY82 874 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 ANKRD13AQ8IZ07 590 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 TRMT2AQ8IZ69 625 aaKnown RBP5.09□□□□□ -1.59
SPG11-218ENST00000559754 RNF169Q8NCN4 708 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 TOR3AQ9H497 397 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 VTA1Q9NP79 307 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 LANCL2Q9NS86 450 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 SCOCQ9UIL1 159 aa5.09□□□□□ -1.59
SPG11-218ENST00000559754 CXorf49A8MYA2 514 aaPredicted RBP5.08□□□□□ -1.6
SPG11-218ENST00000559754 ADCY6O43306 1168 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
SPG11-218ENST00000559754 SREBF1P36956 1147 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 MALLQ13021 153 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 CSRP2Q16527 193 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 PDCD4Q53EL6 469 aaKnown RBP5.08□□□□□ -1.6
SPG11-218ENST00000559754 Q6ZVL8 140 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 VRK3Q8IV63 474 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 DNAJC10Q8IXB1 793 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 LCORLQ8N3X6 602 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 CPEB3Q8NE35 698 aaKnown RBP5.08□□□□□ -1.6
SPG11-218ENST00000559754 REPS2Q8NFH8 660 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 ATL2Q8NHH9 583 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 SENP6Q9GZR1 1112 aaPredicted RBP5.08□□□□□ -1.6
SPG11-218ENST00000559754 SERHL2Q9H4I8 314 aa5.08□□□□□ -1.6
SPG11-218ENST00000559754 DNAJC28Q9NX36 388 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms