RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 ZNF131P52739 623 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 ZP2Q05996 745 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 MCM6Q14566 821 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 NAB2Q15742 525 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 ZNF568Q3ZCX4 644 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 SPECC1Q5M775 1068 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 LLGL2Q6P1M3 1020 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 CEP120Q8N960 986 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 EPSTI1Q96J88 318 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 CLIC6Q96NY7 704 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 NTPCRQ9BSD7 190 aaKnown RBP12.03□□□□□ -0.48
SPG11-216ENST00000559347 HERC2P3Q9BVR0 1158 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 MRPL4Q9BYD3 311 aaKnown RBP12.03□□□□□ -0.48
SPG11-216ENST00000559347 CDT1Q9H211 546 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 CXCL16Q9H2A7 254 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 PTPRHQ9HD43 1115 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 CD320Q9NPF0 282 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 LARSQ9P2J5 1176 aaKnown RBP12.03□□□□□ -0.48
SPG11-216ENST00000559347 DAXXQ9UER7 740 aaPredicted RBP12.03□□□□□ -0.48
SPG11-216ENST00000559347 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 GDAQ9Y2T3 454 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 HCFC2Q9Y5Z7 792 aa12.03□□□□□ -0.48
SPG11-216ENST00000559347 TSC2P49815 1807 aa12.02□□□□□ -0.48
SPG11-216ENST00000559347 ALDH2P05091 517 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 MAPTP10636 758 aaKnown RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 PROZP22891 400 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 TUSC3Q13454 348 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 GIT2Q14161 759 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 DHX8Q14562 1220 aaKnown RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 BMS1Q14692 1282 aaKnown RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 SLC39A14Q15043 492 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 ANKRD54Q6NXT1 300 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 APBB1IPQ7Z5R6 666 aaPredicted RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 ADHFE1Q8IWW8 467 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 KCNN1Q92952 543 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 CACNG4Q9UBN1 327 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
SPG11-216ENST00000559347 USP15Q9Y4E8 981 aaPredicted RBP12.02□□□□□ -0.49
SPG11-216ENST00000559347 K7ENM7 598 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 CLASP2O75122 1294 aaKnown RBP12.01□□□□□ -0.49
SPG11-216ENST00000559347 NR1I2O75469 434 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 BRD1O95696 1058 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 CXCL14O95715 111 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 URODP06132 367 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 TXLNAP40222 546 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 GRM5P41594 1212 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 SMTNP53814 917 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 STRN3Q13033 797 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 HSP90AA2PQ14568 343 aaPredicted RBP12.01□□□□□ -0.49
SPG11-216ENST00000559347 FUT10Q6P4F1 479 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 MPZL3Q6UWV2 235 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 GJD3Q8N144 294 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 KRI1Q8N9T8 703 aaKnown RBP12.01□□□□□ -0.49
SPG11-216ENST00000559347 LINC00301Q8NCQ3 95 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
SPG11-216ENST00000559347 CASP10Q92851 521 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPG11-216ENST00000559347 PAAF1Q9BRP4 392 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 ANKFY1Q9P2R3 1169 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 KCNG1Q9UIX4 513 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 ADAM28Q9UKQ2 775 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 TCHHQ07283 1943 aa12.01□□□□□ -0.49
SPG11-216ENST00000559347 CASTOR2A6NHX0 329 aa12□□□□□ -0.49
SPG11-216ENST00000559347 C19orf67A6NJJ6 358 aa12□□□□□ -0.49
SPG11-216ENST00000559347 H0YCG3 227 aa12□□□□□ -0.49
SPG11-216ENST00000559347 LILRB3O75022 631 aa12□□□□□ -0.49
SPG11-216ENST00000559347 TBCAO75347 108 aaKnown RBP12□□□□□ -0.49
SPG11-216ENST00000559347 TOM1L1O75674 476 aa12□□□□□ -0.49
SPG11-216ENST00000559347 FAM13AO94988 1023 aa12□□□□□ -0.49
SPG11-216ENST00000559347 KIF4AO95239 1232 aa12□□□□□ -0.49
SPG11-216ENST00000559347 F13A1P00488 732 aa12□□□□□ -0.49
SPG11-216ENST00000559347 KRT18P05783 430 aaKnown RBP12□□□□□ -0.49
SPG11-216ENST00000559347 THP07101 528 aa12□□□□□ -0.49
SPG11-216ENST00000559347 ZSCAN22P10073 491 aaPredicted RBP12□□□□□ -0.49
SPG11-216ENST00000559347 MCF2P10911 925 aa12□□□□□ -0.49
SPG11-216ENST00000559347 EPCAMP16422 314 aa12□□□□□ -0.49
SPG11-216ENST00000559347 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SPG11-216ENST00000559347 GLUD2P49448 558 aa12□□□□□ -0.49
SPG11-216ENST00000559347 PKP1Q13835 747 aa12□□□□□ -0.49
SPG11-216ENST00000559347 NOLC1Q14978 699 aaKnown RBP eCLIP12□□□□□ -0.49
SPG11-216ENST00000559347 STK38Q15208 465 aa12□□□□□ -0.49
SPG11-216ENST00000559347 GLRA4Q5JXX5 417 aa12□□□□□ -0.49
SPG11-216ENST00000559347 SYCE2Q6PIF2 218 aa12□□□□□ -0.49
SPG11-216ENST00000559347 ZPBP2Q6X784 338 aa12□□□□□ -0.49
SPG11-216ENST00000559347 TAS1R1Q7RTX1 841 aa12□□□□□ -0.49
SPG11-216ENST00000559347 HAUS6Q7Z4H7 955 aa12□□□□□ -0.49
SPG11-216ENST00000559347 SUSD6Q92537 303 aa12□□□□□ -0.49
SPG11-216ENST00000559347 RABGGTAQ92696 567 aa12□□□□□ -0.49
SPG11-216ENST00000559347 SNX27Q96L92 541 aa12□□□□□ -0.49
SPG11-216ENST00000559347 PPP1R10Q96QC0 940 aaKnown RBP12□□□□□ -0.49
SPG11-216ENST00000559347 FIZ1Q96SL8 496 aa12□□□□□ -0.49
SPG11-216ENST00000559347 POP1Q99575 1024 aaKnown RBP12□□□□□ -0.49
SPG11-216ENST00000559347 CCDC94Q9BW85 323 aaPredicted RBP12□□□□□ -0.49
SPG11-216ENST00000559347 COLEC11Q9BWP8 271 aa12□□□□□ -0.49
SPG11-216ENST00000559347 PARVGQ9HBI0 331 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms