RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 SRPRBQ9Y5M8 271 aaKnown RBP16.81■□□□□ 0.28
RPL28-207ENST00000558815 HCFC2Q9Y5Z7 792 aa16.81■□□□□ 0.28
RPL28-207ENST00000558815 TRIP11Q15643 1979 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 PTGESO14684 152 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 URODP06132 367 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 MATR3P43243 847 aaKnown RBP eCLIP16.8■□□□□ 0.28
RPL28-207ENST00000558815 COASYQ13057 564 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 SMAD2Q15796 467 aaKnown RBP16.8■□□□□ 0.28
RPL28-207ENST00000558815 GLRA4Q5JXX5 417 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 ANKRD54Q6NXT1 300 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 GJD3Q8N144 294 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 SMRP1Q8NCR6 262 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
RPL28-207ENST00000558815 CASP10Q92851 521 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 PAAF1Q9BRP4 392 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 HERC2P3Q9BVR0 1158 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 CCSER1Q9C0I3 900 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
RPL28-207ENST00000558815 ANKFY1Q9P2R3 1169 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 TFIP11Q9UBB9 837 aaKnown RBP16.8■□□□□ 0.28
RPL28-207ENST00000558815 CCDC39Q9UFE4 941 aa16.8■□□□□ 0.28
RPL28-207ENST00000558815 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
RPL28-207ENST00000558815 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 SOD2P04179 222 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 THP07101 528 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 TUSC3Q13454 348 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 GIT2Q14161 759 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 TAS1R1Q7RTX1 841 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 MYCT1Q8N699 235 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 TMEM161BQ8NDZ6 487 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 BICD1Q96G01 975 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 ZBTB45Q96K62 511 aaPredicted RBP16.79■□□□□ 0.28
RPL28-207ENST00000558815 B3GALT6Q96L58 329 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 CCDC94Q9BW85 323 aaPredicted RBP16.79■□□□□ 0.28
RPL28-207ENST00000558815 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
RPL28-207ENST00000558815 ODF2LQ9ULJ1 636 aa16.79■□□□□ 0.28
RPL28-207ENST00000558815 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 K7ENM7 598 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 TBCAO75347 108 aaKnown RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 TADA2AO75478 443 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 MAPTP10636 758 aaKnown RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 EPCAMP16422 314 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 KLRC2P26717 231 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 GLUD2P49448 558 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 YARSP54577 528 aaKnown RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 ZP2Q05996 745 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 KCNC3Q14003 757 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 RRAGBQ5VZM2 374 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 MPZL3Q6UWV2 235 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 DYMQ7RTS9 669 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 ADHFE1Q8IWW8 467 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 KRI1Q8N9T8 703 aaKnown RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 KHSRPQ92945 711 aaKnown RBP eCLIP16.78■□□□□ 0.28
RPL28-207ENST00000558815 ZNF396Q96N95 335 aaPredicted RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 NTPCRQ9BSD7 190 aaKnown RBP16.78■□□□□ 0.28
RPL28-207ENST00000558815 EMILIN2Q9BXX0 1053 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 PANK2Q9BZ23 570 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 KCNG1Q9UIX4 513 aa16.78■□□□□ 0.28
RPL28-207ENST00000558815 CITO14578 2027 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
RPL28-207ENST00000558815 GRM5P41594 1212 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 NCKAP1LP55160 1127 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 SEZ6Q53EL9 994 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 FUT10Q6P4F1 479 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 SYCE2Q6PIF2 218 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 TMEM184AQ6ZMB5 413 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 HAUS6Q7Z4H7 955 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 C12orf76Q8N812 135 aaPredicted RBP16.77■□□□□ 0.28
RPL28-207ENST00000558815 KLHL5Q96PQ7 755 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 GPR62Q9BZJ7 368 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 PARVGQ9HBI0 331 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 PTPRHQ9HD43 1115 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 DAXXQ9UER7 740 aaPredicted RBP16.77■□□□□ 0.28
RPL28-207ENST00000558815 STK39Q9UEW8 545 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 PRKAG3Q9UGI9 489 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 CDH22Q9UJ99 828 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 ADAM28Q9UKQ2 775 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 IRAK3Q9Y616 596 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 C5orf42Q9H799 3197 aa16.77■□□□□ 0.28
RPL28-207ENST00000558815 PLXNA3P51805 1871 aa16.77■□□□□ 0.27
RPL28-207ENST00000558815 TTC28Q96AY4 2481 aa16.77■□□□□ 0.27
RPL28-207ENST00000558815 H0YCG3 227 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 TRAK2O60296 914 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 KIF4AO95239 1232 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 ZSCAN22P10073 491 aaPredicted RBP16.76■□□□□ 0.27
RPL28-207ENST00000558815 MYBP10242 640 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 MCF2P10911 925 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 DDIT3P35638 169 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
RPL28-207ENST00000558815 RARS2Q5T160 578 aaKnown RBP16.76■□□□□ 0.27
RPL28-207ENST00000558815 KANK3Q6NY19 840 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 GLYCTKQ8IVS8 523 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 PDILTQ8N807 584 aa16.76■□□□□ 0.27
RPL28-207ENST00000558815 POP1Q99575 1024 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms