RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ANO3Q9BYT9 981 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 WNT8AQ9H1J5 351 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 NELFAQ9H3P2 528 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 DEF6Q9H4E7 631 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 C14orf93Q9H972 538 aaKnown RBP3.87□□□□□ -1.79
HERC1-203ENST00000558532 VTA1Q9NP79 307 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 EVLQ9UI08 416 aaPredicted RBP3.87□□□□□ -1.79
HERC1-203ENST00000558532 PRSS50Q9UI38 385 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 SYNPO2Q9UMS6 1093 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 NOC2LQ9Y3T9 749 aaKnown RBP3.87□□□□□ -1.79
HERC1-203ENST00000558532 NUMBLQ9Y6R0 609 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 IFT172Q9UG01 1749 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 NOS1P29475 1434 aa3.87□□□□□ -1.79
HERC1-203ENST00000558532 TRPM2O94759 1503 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 SAMD9LQ8IVG5 1584 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 A0A1W2PRX2 142 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 MATN3O15232 486 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 MAFGO15525 162 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 MTSS1O43312 755 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 BRINP1O60477 761 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 RAB11FIP3O75154 756 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 BCAR3O75815 825 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CLSTN1O94985 981 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 FSBPO95073 299 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 LY86O95711 162 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CT47B1P0C2W7 299 aaPredicted RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 TNFRSF1AP19438 455 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 ACO1P21399 889 aaKnown RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 KIR2DL3P43628 341 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 GPR15P49685 360 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 TMPRSS15P98073 1019 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 PPARAQ07869 468 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CNGB1Q14028 1251 aaPredicted RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 GRM7Q14831 915 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 SYCP1Q15431 976 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 ZXDCQ2QGD7 858 aaPredicted RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 CT47A1Q5JQC4 288 aaPredicted RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 SPRED1Q7Z699 444 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CREBRFQ8IUR6 639 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 GAB3Q8WWW8 586 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 ANP32BQ92688 251 aaKnown RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 ADOQ96SZ5 270 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CDK5RAP1Q96SZ6 601 aaKnown RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 GPR20Q99678 358 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 KCTD10Q9H3F6 313 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 PANK3Q9H999 370 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 IL23AQ9NPF7 189 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 HECAQ9UBI9 543 aaPredicted RBP3.86□□□□□ -1.79
HERC1-203ENST00000558532 USP18Q9UMW8 372 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 MYRFQ9Y2G1 1151 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 SH3BP1Q9Y3L3 701 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 TESMINQ9Y4I5 508 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 CDC42BPBQ9Y5S2 1711 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 NUP155O75694 1391 aa3.86□□□□□ -1.79
HERC1-203ENST00000558532 DEPDC5O75140 1603 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 A0A1W2PR48 441 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 GPR39O43194 453 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 DAPK3O43293 454 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 TMEM127O75204 238 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 BAG4O95429 457 aaKnown RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 JUNP05412 331 aaKnown RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 LPLP06858 475 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 CNGA1P29973 690 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 RARSP54136 660 aaKnown RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 TMF1P82094 1093 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 GABPB1Q06547 395 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 PUM1Q14671 1186 aaKnown RBP eCLIP3.85□□□□□ -1.79
HERC1-203ENST00000558532 WDR43Q15061 677 aaKnown RBP eCLIP3.85□□□□□ -1.79
HERC1-203ENST00000558532 PRKD1Q15139 912 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 FSCN1Q16658 493 aaKnown RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 MAN2A1Q16706 1144 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 CCDC178Q5BJE1 867 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 CT83Q5H943 113 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 BMP2KLQ5H9B9 411 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 SPTY2D1Q68D10 685 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 MSL3Q8N5Y2 521 aaKnown RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 PIBF1Q8WXW3 757 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ANKRD7Q92527 254 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 UIMC1Q96RL1 719 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ENKD1Q9H0I2 346 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 RWDD1Q9H446 243 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 TLR9Q9NR96 1032 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ING3Q9NXR8 418 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ZHX1Q9UKY1 873 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 NAP1L2Q9ULW6 460 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 CDY2AQ9Y6F7 541 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ZNF644Q9H582 1327 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 ABCC11Q96J66 1382 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 PIK3R4Q99570 1358 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 PRG4Q92954 1404 aaPredicted RBP3.85□□□□□ -1.79
HERC1-203ENST00000558532 ERVK-7P63135 1459 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ERCC6Q03468 1493 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 ZNF518AQ6AHZ1 1483 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 CDC42BPGQ6DT37 1551 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 SETBP1Q9Y6X0 1596 aa3.85□□□□□ -1.79
HERC1-203ENST00000558532 TUBGCP6Q96RT7 1819 aa3.84□□□□□ -1.79
HERC1-203ENST00000558532 UBE2QL1A1L167 161 aa3.84□□□□□ -1.79
HERC1-203ENST00000558532 CTIFO43310 598 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms