RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 GOLGA8IPA6NC78 632 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 GOLGA8JA6NMD2 632 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 ADRB2P07550 413 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 CLTBP09497 229 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 SKIP12755 728 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 ZSCAN20P17040 1043 aaPredicted RBP16.17■□□□□ 0.18
VPS18-202ENST00000558474 FGFR4P22455 802 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 RAB27AP51159 221 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 KCNH2Q12809 1159 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 ZBTB33Q86T24 672 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 RDH13Q8NBN7 331 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 APBB2Q92870 758 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 IQCDQ96DY2 449 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 ERGIC2Q96RQ1 377 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 FTHL17Q9BXU8 183 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 PLEKHA5Q9HAU0 1116 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 TBX21Q9UL17 535 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 USP20Q9Y2K6 914 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 ITIH6Q6UXX5 1313 aa16.17■□□□□ 0.18
VPS18-202ENST00000558474 GHRP10912 638 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 RFC2P35250 354 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 PBX1P40424 430 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 ACOT2P49753 483 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 UBXN1Q04323 297 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 CCDC173Q0VFZ6 552 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 CETN1Q12798 172 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 TCERG1LQ5VWI1 586 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 NT5DC4Q86YG4 428 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 HACE1Q8IYU2 909 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 PDLIM2Q96JY6 352 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 FNBP1Q96RU3 617 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 CCDC94Q9BW85 323 aaPredicted RBP16.16■□□□□ 0.18
VPS18-202ENST00000558474 TRIM6Q9C030 488 aaPredicted RBP16.16■□□□□ 0.18
VPS18-202ENST00000558474 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 ASB7Q9H672 318 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
VPS18-202ENST00000558474 RPF1Q9H9Y2 349 aaKnown RBP16.16■□□□□ 0.18
VPS18-202ENST00000558474 ANK1P16157 1881 aa16.16■□□□□ 0.18
VPS18-202ENST00000558474 ZNF623O75123 536 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 NPTXRO95502 500 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 CD52P31358 61 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 NFX1Q12986 1120 aaKnown RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 DSC3Q14574 896 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 LRRC26Q2I0M4 334 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 DCAF17Q5H9S7 520 aaPredicted RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 UBXN11Q5T124 520 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 TWF2Q6IBS0 349 aaKnown RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 WDR49Q8IV35 697 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 VSTM4Q8IW00 320 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 THNSL1Q8IYQ7 743 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 ZSWIM2Q8NEG5 633 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 ACAP3Q96P50 834 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 IFIH1Q9BYX4 1025 aaKnown RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 TMEM39AQ9NV64 488 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 INTS13Q9NVM9 706 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 IMPACTQ9P2X3 320 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 ATP11BQ9Y2G3 1177 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 DAAM1Q9Y4D1 1078 aa16.15■□□□□ 0.18
VPS18-202ENST00000558474 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.15■□□□□ 0.18
VPS18-202ENST00000558474 CITO14578 2027 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
VPS18-202ENST00000558474 TEX33O43247 280 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 CXCL10P02778 98 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 HARSP12081 509 aaKnown RBP16.14■□□□□ 0.17
VPS18-202ENST00000558474 FMO5P49326 533 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 YARSP54577 528 aaKnown RBP16.14■□□□□ 0.17
VPS18-202ENST00000558474 SPECC1LQ69YQ0 1117 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 CDR2LQ86X02 465 aaPredicted RBP16.14■□□□□ 0.17
VPS18-202ENST00000558474 PPP1R9BQ96SB3 815 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 CGRRF1Q99675 332 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 NUP58Q9BVL2 599 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 TMEM8AQ9HCN3 771 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 C1orf112Q9NSG2 853 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
VPS18-202ENST00000558474 DERAQ9Y315 318 aa16.14■□□□□ 0.17
VPS18-202ENST00000558474 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.14■□□□□ 0.17
VPS18-202ENST00000558474 LRRIQ3A6PVS8 624 aaPredicted RBP16.13■□□□□ 0.17
VPS18-202ENST00000558474 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 EN2P19622 333 aaPredicted RBP16.13■□□□□ 0.17
VPS18-202ENST00000558474 TNFSF9P41273 254 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 TRIM14Q14142 442 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 MBTPS1Q14703 1052 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 ENOX2Q16206 610 aaKnown RBP16.13■□□□□ 0.17
VPS18-202ENST00000558474 PLEKHG4Q58EX7 1191 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 FIGNQ5HY92 759 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 ZBTB41Q5SVQ8 909 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 C1orf220Q5T0J3 134 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 KRT39Q6A163 491 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 GBP6Q6ZN66 633 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 MRPL10Q7Z7H8 261 aaKnown RBP16.13■□□□□ 0.17
VPS18-202ENST00000558474 SEPT8Q92599 483 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 EIF2AQ9BY44 585 aaKnown RBP16.13■□□□□ 0.17
VPS18-202ENST00000558474 TMX1Q9H3N1 280 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 RGS18Q9NS28 235 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 FAM105AQ9NUU6 356 aa16.13■□□□□ 0.17
VPS18-202ENST00000558474 COQ4Q9Y3A0 265 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms