RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MIOSQ9NXC5 875 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 LMCD1Q9NZU5 365 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 PLAGL2Q9UPG8 496 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 REV3LO60673 3130 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 ZMYM2Q9UBW7 1377 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 INPPL1O15357 1258 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 PPP1R37O75864 691 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 FGF18O76093 207 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 DDHD2O94830 711 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 ZNF202O95125 648 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 CSPG5O95196 566 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 POU3F3P20264 500 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-205ENST00000558428 PPM1AP35813 382 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 ALDH7A1P49419 539 aaKnown RBP13.52□□□□□ -0.25
SMAD3-205ENST00000558428 CASP5P51878 434 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 YARSP54577 528 aaKnown RBP13.52□□□□□ -0.25
SMAD3-205ENST00000558428 BCAR1P56945 870 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 OSTNP61366 133 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 MCL1Q07820 350 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 ALCAMQ13740 583 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 L1TD1Q5T7N2 865 aaKnown RBP13.52□□□□□ -0.25
SMAD3-205ENST00000558428 UNC13DQ70J99 1090 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 PPM1EQ8WY54 764 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 IPO9Q96P70 1041 aaKnown RBP13.52□□□□□ -0.25
SMAD3-205ENST00000558428 ACCSQ96QU6 501 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 FGFBP2Q9BYJ0 223 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 DNAJB4Q9UDY4 337 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 EXOC7Q9UPT5 735 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.25
SMAD3-205ENST00000558428 PVALEFA0A1B0GWK0 134 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 CARNS1A5YM72 827 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 B4GALT3O60512 393 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SLC11A1P49279 550 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 KCNA1Q09470 495 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 GRIK3Q13003 919 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SEZ6Q53EL9 994 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SLC39A11Q8N1S5 342 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SPPL3Q8TCT6 385 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 POF1BQ8WVV4 589 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
SMAD3-205ENST00000558428 ACAP3Q96P50 834 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 HAPLN2Q9GZV7 340 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 LMAN2LQ9H0V9 348 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 TOPORSQ9NS56 1045 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
SMAD3-205ENST00000558428 SPTBN5Q9NRC6 3674 aaKnown RBP13.51□□□□□ -0.25
SMAD3-205ENST00000558428 BRWD1Q9NSI6 2320 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 PTGESO14684 152 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 PRPF6O94906 941 aaKnown RBP13.5□□□□□ -0.25
SMAD3-205ENST00000558428 MYL1P05976 194 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 GALTP07902 379 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 DNAJB1P25685 340 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 KRT17Q04695 432 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 UBE3AQ05086 875 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 SLC39A4Q6P5W5 647 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 COLGALT2Q8IYK4 626 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 SYCP3Q8IZU3 236 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 TMEM169Q96HH4 297 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 CCDC34Q96HJ3 373 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 CXCL16Q9H2A7 254 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 EXOC1Q9NV70 894 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
SMAD3-205ENST00000558428 FAN1Q9Y2M0 1017 aa13.5□□□□□ -0.25
SMAD3-205ENST00000558428 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
SMAD3-205ENST00000558428 TISP43B9A030 160 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 NRP1O14786 923 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 OGTO15294 1046 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 KLRC4O43908 158 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 ALDH2P05091 517 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 THP07101 528 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 OR1G1P47890 313 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 EHHADHQ08426 723 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 DSC1Q08554 894 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 TIGD5Q53EQ6 642 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 GLRA4Q5JXX5 417 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 SLFN12LQ6IEE8 588 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 KANK3Q6NY19 840 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 TMEM173Q86WV6 379 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-205ENST00000558428 FMR1NBQ8N0W7 255 aaPredicted RBP13.49□□□□□ -0.25
SMAD3-205ENST00000558428 IGSF21Q96ID5 467 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 SNX27Q96L92 541 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 TMEM206Q9H813 350 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 LZTS1Q9Y250 596 aa13.49□□□□□ -0.25
SMAD3-205ENST00000558428 PRG3Q9Y2Y8 225 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms