RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 PCDHA7Q9UN72 937 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 FAM50BQ9Y247 325 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 SSX2IPQ9Y2D8 614 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 HES2Q9Y543 173 aa9.3□□□□□ -0.92
TPM1-213ENST00000558400 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
TPM1-213ENST00000558400 NPHP3-ACAD11A0A0J9YXS1 232 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 NRP1O14786 923 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 DDHD2O94830 711 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 CXCL14O95715 111 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 PROZP22891 400 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 DNAJB1P25685 340 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 MLH1P40692 756 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 GRM5P41594 1212 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ERVFC1P60507 584 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 GTF2BQ00403 316 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 DSC1Q08554 894 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ALCAMQ13740 583 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 PKP1Q13835 747 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 SMC1AQ14683 1233 aaKnown RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 FOXD4L6Q3SYB3 417 aaPredicted RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 AXDND1Q5T1B0 1012 aaPredicted RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 ADALQ6DHV7 355 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 SLFN12LQ6IEE8 588 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 MPZL3Q6UWV2 235 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 FOXD4L3Q6VB84 417 aaPredicted RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 TAS1R3Q7RTX0 852 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ZNF720Q7Z2F6 126 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 VPS52Q8N1B4 723 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 MRPL43Q8N983 215 aaKnown RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 GSTCDQ8NEC7 633 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 HVCN1Q96D96 273 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 SPATA32Q96LK8 384 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ACAP3Q96P50 834 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 TSPAN18Q96SJ8 248 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 TCF25Q9BQ70 676 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 TNMDQ9H2S6 317 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 UBE2ZQ9H832 354 aaPredicted RBP9.29□□□□□ -0.92
TPM1-213ENST00000558400 MAGEF1Q9HAY2 307 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 ENTPD7Q9NQZ7 604 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 MIOSQ9NXC5 875 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 SNTG2Q9NY99 539 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 TBX20Q9UMR3 447 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 PCDHB13Q9Y5F0 798 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 IRAK3Q9Y616 596 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 CHD7Q9P2D1 2997 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 CHD9Q3L8U1 2897 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 XIRP2A4UGR9 3374 aa9.29□□□□□ -0.92
TPM1-213ENST00000558400 MYMKA6NI61 221 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 FSCN2O14926 492 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ATMINO43313 823 aaPredicted RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 RECQL4O94761 1208 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 SRGAP2BP0DMP2 458 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 CTSAP10619 480 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 CMA1P23946 247 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 OR1G1P47890 313 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 SLC11A1P49279 550 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 LIG4P49917 911 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 SCNN1GP51170 649 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 AFF1P51825 1210 aaKnown RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 POU5F1Q01860 360 aaKnown RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 NHLH1Q02575 133 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 MCL1Q07820 350 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 HYAL1Q12794 435 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ADAM15Q13444 863 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 TUSC3Q13454 348 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 POSTNQ15063 836 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 CTC1Q2NKJ3 1217 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 LEXMQ3ZCV2 418 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ZNF568Q3ZCX4 644 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 HERC4Q5GLZ8 1057 aaPredicted RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 EEF1DP3Q658K8 133 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 ASTLQ6HA08 431 aaPredicted RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 SHC4Q6S5L8 630 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 STXBP4Q6ZWJ1 553 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 DYMQ7RTS9 669 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 CCDC65Q8IXS2 484 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 GPR65Q8IYL9 337 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 EFHBQ8N7U6 833 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 PDILTQ8N807 584 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 KHSRPQ92945 711 aaKnown RBP eCLIP9.28□□□□□ -0.92
TPM1-213ENST00000558400 DNAJC19Q96DA6 116 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 BICD1Q96G01 975 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 DDX27Q96GQ7 796 aaKnown RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 IGFLR1Q9H665 355 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 MRPL44Q9H9J2 332 aaKnown RBP9.28□□□□□ -0.92
TPM1-213ENST00000558400 PLEKHA5Q9HAU0 1116 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 OLFML3Q9NRN5 406 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 KBTBD4Q9NVX7 518 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 CLDND1Q9NY35 253 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 HCSTQ9UBK5 93 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
TPM1-213ENST00000558400 USP25Q9UHP3 1055 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms