RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ST3GAL2Q16842 350 aa19.83■□□□□ 0.77
TSPAN3-204ENST00000558394 PRSS55Q6UWB4 352 aaPredicted RBP19.83■□□□□ 0.77
TSPAN3-204ENST00000558394 CEP57Q86XR8 500 aa19.83■□□□□ 0.77
TSPAN3-204ENST00000558394 ZNF579Q8NAF0 562 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-204ENST00000558394 KXD1Q9BQD3 176 aa19.83■□□□□ 0.77
TSPAN3-204ENST00000558394 NID2Q14112 1375 aa19.83■□□□□ 0.76
TSPAN3-204ENST00000558394 CPA1P15085 419 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 IFNAR1P17181 557 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 YWHABP31946 246 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 PPP2R5CQ13362 524 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 TPRG1Q6ZUI0 275 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 RABGGTAQ92696 567 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 CHAMP1Q96JM3 812 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 TTPALQ9BTX7 342 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 FAM126AQ9BYI3 521 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 NXF3Q9H4D5 531 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 PARP2Q9UGN5 583 aa19.82■□□□□ 0.76
TSPAN3-204ENST00000558394 LILRB5O75023 590 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 AKAP5P24588 427 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 HOXA9P31269 272 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 PTENP60484 403 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 NTRK3Q16288 839 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 PSMD5Q16401 504 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 RTP2Q5QGT7 225 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 BLOC1S2Q6QNY1 142 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 TSSK4Q6SA08 328 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 ZNF852Q6ZMS4 543 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 C4orf19Q8IY42 314 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 BLIDQ8IZY5 108 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 FAM20AQ96MK3 541 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 JAKMIP1Q96N16 626 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 LXNQ9BS40 222 aa19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 KMT2BQ9UMN6 2715 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-204ENST00000558394 RPS9P46781 194 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 PPP2R5DQ14738 602 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 FAM171A1Q5VUB5 890 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 PDXDC1Q6P996 788 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 ITFG1Q8TB96 612 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 HASPINQ8TF76 798 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 CLDN23Q96B33 292 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 KLK14Q9P0G3 267 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 COL4A3Q01955 1670 aa19.8■□□□□ 0.76
TSPAN3-204ENST00000558394 NPTXRO95502 500 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 ARF4P18085 180 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 TARSP26639 723 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 NRLP54845 237 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 CCT2P78371 535 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 SSRP1Q08945 709 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 ELAVL2Q12926 359 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 PABPC1LQ4VXU2 614 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 SLC7A14Q8TBB6 771 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 PIK3R5Q8WYR1 880 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 CLSTN3Q9BQT9 956 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 VAV3Q9UKW4 847 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 KCNH3Q9ULD8 1083 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 ARID2Q68CP9 1835 aa19.79■□□□□ 0.76
TSPAN3-204ENST00000558394 SLC37A4O43826 429 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 ADRB1P08588 477 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 ADCY1Q08828 1119 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 TUSC3Q13454 348 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 EPHA7Q15375 998 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 INF2Q27J81 1249 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 AXDND1Q5T1B0 1012 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 SLC27A1Q6PCB7 646 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 KRT25Q7Z3Z0 450 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 GSTCDQ8NEC7 633 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 NELL1Q92832 810 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 YTHDC1Q96MU7 727 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 ZSWIM4Q9H7M6 989 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 WRAP73Q9P2S5 460 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 MRPS23Q9Y3D9 190 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
TSPAN3-204ENST00000558394 CASTOR2A6NHX0 329 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 ECI2O75521 394 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 POU5F1BQ06416 359 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 SPEM2Q0P670 501 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 UVSSAQ2YD98 709 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 NCAPH2Q6IBW4 605 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 NPAS3Q8IXF0 933 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 LNX1Q8TBB1 728 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 ING5Q8WYH8 240 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 NCOA5Q9HCD5 579 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 PRMT8Q9NR22 394 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 CACNG4Q9UBN1 327 aa19.77■□□□□ 0.76
TSPAN3-204ENST00000558394 CCDC194A0A1B0GVG4 234 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 CPLX1O14810 134 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 DEXIO95424 95 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 POU2F2P09086 479 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 GCFC2P16383 781 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 MTAPQ13126 283 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 CTTNQ14247 550 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 CDR2LQ86X02 465 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 IFNLR1Q8IU57 520 aaPredicted RBP19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 TPH2Q8IWU9 490 aa19.76■□□□□ 0.75
TSPAN3-204ENST00000558394 DAGLBQ8NCG7 672 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms