RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 FZD8Q9H461 694 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
TPM1-211ENST00000558314 TRIOO75962 3097 aa17.15■□□□□ 0.34
TPM1-211ENST00000558314 TDRD15B5MCY1 1934 aaKnown RBP17.14■□□□□ 0.33
TPM1-211ENST00000558314 CCDC169A6NNP5 214 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 RECQL4O94761 1208 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 NAMPTP43490 491 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 ORC2Q13416 577 aaPredicted RBP17.14■□□□□ 0.33
TPM1-211ENST00000558314 TUSC3Q13454 348 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 PPP2R5AQ15172 486 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 EEF1DP3Q658K8 133 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 FLCNQ8NFG4 579 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 DPP7Q9UHL4 492 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 FBXL21Q9UKT6 434 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 USTQ9Y2C2 406 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 PCDHB6Q9Y5E3 794 aa17.14■□□□□ 0.33
TPM1-211ENST00000558314 MYO10Q9HD67 2058 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 TGM5O43548 720 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 EDN1P05305 212 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 THP07101 528 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 TCF15Q12870 199 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 PTGDRQ13258 359 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 FAM187BQ17R55 369 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 ST13P5Q8NFI4 369 aaPredicted RBP17.13■□□□□ 0.33
TPM1-211ENST00000558314 ATOH1Q92858 354 aaPredicted RBP17.13■□□□□ 0.33
TPM1-211ENST00000558314 PRRX2Q99811 253 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 RAB34Q9BZG1 259 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
TPM1-211ENST00000558314 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.339e-6■■■■■ 68.9
TPM1-211ENST00000558314 E9PMD0 336 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 H0Y858 1186 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 STK25O00506 426 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 ACKR2O00590 384 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 KIF4AO95239 1232 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 CDC25AP30304 524 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.33
TPM1-211ENST00000558314 OSTNP61366 133 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 FAM171A1Q5VUB5 890 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 RNF168Q8IYW5 571 aaPredicted RBP17.12■□□□□ 0.33
TPM1-211ENST00000558314 C4orf32Q8N8J7 132 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.12■□□□□ 0.33
TPM1-211ENST00000558314 CHST7Q9NS84 486 aa17.12■□□□□ 0.33
TPM1-211ENST00000558314 K7ERI5 159 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 PTGESO14684 152 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 HARSP12081 509 aaKnown RBP17.11■□□□□ 0.33
TPM1-211ENST00000558314 RFX1P22670 979 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 PEX3P56589 373 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 ATF7IP2Q5U623 682 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 KRT79Q5XKE5 535 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 GET4Q7L5D6 327 aaPredicted RBP17.11■□□□□ 0.33
TPM1-211ENST00000558314 RSAD2Q8WXG1 361 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 STAMQ92783 540 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 KIFAP3Q92845 792 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 PLIN2Q99541 437 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 KIF2CQ99661 725 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 CCDC113Q9H0I3 377 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 KCNK12Q9HB15 430 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 DNM3Q9UQ16 869 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 CLUHO75153 1309 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
TPM1-211ENST00000558314 PIEZO1Q92508 2521 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 HIP1RO75146 1068 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 TOB1P50616 345 aaPredicted RBP17.1■□□□□ 0.33
TPM1-211ENST00000558314 EFNA5P52803 228 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 CREMQ03060 361 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 TDGQ13569 410 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 PSMD5Q16401 504 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 DTHD1Q6ZMT9 781 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 TMEM105Q8N8V8 129 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
TPM1-211ENST00000558314 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 PLEKHA4Q9H4M7 779 aa17.1■□□□□ 0.33
TPM1-211ENST00000558314 WDR6Q9NNW5 1121 aaKnown RBP17.1■□□□□ 0.33
TPM1-211ENST00000558314 NARSO43776 548 aaKnown RBP17.09■□□□□ 0.33
TPM1-211ENST00000558314 N4BP1O75113 896 aaKnown RBP17.09■□□□□ 0.33
TPM1-211ENST00000558314 EFEMP2O95967 443 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 CFHP08603 1231 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 MUTP22033 750 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.33
TPM1-211ENST00000558314 PDIA5Q14554 519 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 LIN9Q5TKA1 542 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 APBB1IPQ7Z5R6 666 aaPredicted RBP17.09■□□□□ 0.33
TPM1-211ENST00000558314 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
TPM1-211ENST00000558314 MYADMQ96S97 322 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 GOLGA2P5Q9HBQ8 144 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 KMT5AQ9NQR1 393 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms