RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SNRPA1P09661 255 aaKnown RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 MAKP20794 623 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 APOBEC3AP31941 199 aaPredicted RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 PTGS2P35354 604 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SLC16A1P53985 500 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 RAP2BP61225 183 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 MFSD14BQ5SR56 506 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 ANKS6Q68DC2 871 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 Q6ZVL8 140 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 HTR3DQ70Z44 454 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 ZNF572Q7Z3I7 529 aaPredicted RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 PNMA8AQ86V59 439 aaPredicted RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 ZFPM1Q8IX07 1006 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 Q8N1X5 172 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 ZNF276Q8N554 614 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SLC16A11Q8NCK7 471 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 C1orf162Q8NEQ5 155 aaPredicted RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 ZFP28Q8NHY6 868 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 CEP95Q96GE4 821 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 NDC1Q9BTX1 674 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SCAND2PQ9GZW5 306 aaPredicted RBP4.54□□□□□ -1.68
SPG11-206ENST00000558093 LDAHQ9H6V9 325 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 MANSC1Q9H8J5 431 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SLC2A4RGQ9NR83 387 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 SCOCQ9UIL1 159 aa4.54□□□□□ -1.68
SPG11-206ENST00000558093 KLHL33A6NCF5 533 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 TBKBP1A7MCY6 615 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 GPR32O75388 356 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 SPATA31D3P0C874 917 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 IL2RBP14784 551 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 SREBF1P36956 1147 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 CLRN1P58418 232 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 PPP3CAQ08209 521 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 MGAT2Q10469 447 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 SP140Q13342 867 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 PTPROQ16827 1216 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 FAM47AQ5JRC9 791 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 RRP12Q5JTH9 1297 aaKnown RBP4.53□□□□□ -1.68
SPG11-206ENST00000558093 SPATA31D4Q6ZUB0 917 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 MIGA2Q7L4E1 593 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 CCHCR1Q8TD31 782 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 SLC25A43Q8WUT9 341 aaPredicted RBP4.53□□□□□ -1.68
SPG11-206ENST00000558093 PHACTR3Q96KR7 559 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 C7orf25Q9BPX7 421 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 CCDC8Q9H0W5 538 aaPredicted RBP4.53□□□□□ -1.68
SPG11-206ENST00000558093 MMRN2Q9H8L6 949 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 ZNF277Q9NRM2 450 aaPredicted RBP4.53□□□□□ -1.68
SPG11-206ENST00000558093 TRPM5Q9NZQ8 1165 aa4.53□□□□□ -1.68
SPG11-206ENST00000558093 AJAP1Q9UKB5 411 aaPredicted RBP4.53□□□□□ -1.68
SPG11-206ENST00000558093 CYR61O00622 381 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 PJA2O43164 708 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 TEX33O43247 280 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 AKAP8O43823 692 aaKnown RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 NDUFS2O75306 463 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 PPFIA4O75335 1185 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 PEX11BO96011 259 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 RBP3P10745 1247 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 ALOX15P16050 662 aaPredicted RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 ATP5JP18859 108 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 CCND1P24385 295 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 RNASE9P60153 205 aaKnown RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 SLC25A3Q00325 362 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 NHLH2Q02577 135 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 ATP2B3Q16720 1220 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 PTPN21Q16825 1174 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 ATXN7L2Q5T6C5 722 aaPredicted RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 AFMIDQ63HM1 303 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 RHOT1Q8IXI2 618 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 CBARPQ8N350 705 aaPredicted RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 SLC35B2Q8TB61 432 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 NRG4Q8WWG1 115 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 NEU4Q8WWR8 484 aaPredicted RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 CLIP3Q96DZ5 547 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 FAXDC2Q96IV6 333 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 DCLRE1CQ96SD1 692 aaKnown RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 KRTAP4-11Q9BYQ6 195 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 KCNH6Q9H252 994 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 HOMER2Q9NSB8 354 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 INTUQ9ULD6 942 aa4.52□□□□□ -1.69
SPG11-206ENST00000558093 RUVBL1Q9Y265 456 aaKnown RBP4.52□□□□□ -1.69
SPG11-206ENST00000558093 CXorf49A8MYA2 514 aaPredicted RBP4.51□□□□□ -1.69
SPG11-206ENST00000558093 LEFTY2O00292 366 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 GABRDO14764 452 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 NARSO43776 548 aaKnown RBP4.51□□□□□ -1.69
SPG11-206ENST00000558093 ALDH1A3P47895 512 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 FHL2Q14192 279 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 BMT2Q1RMZ1 405 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 IGFL4Q6B9Z1 124 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 DRICH1Q6PGQ1 229 aaPredicted RBP4.51□□□□□ -1.69
SPG11-206ENST00000558093 GPRIN1Q7Z2K8 1008 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 GDF7Q7Z4P5 450 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 DRC7Q8IY82 874 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.51□□□□□ -1.69
SPG11-206ENST00000558093 STON2Q8WXE9 905 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 JADE3Q92613 823 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 DPF2Q92785 391 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 HAS1Q92839 578 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 CYFIP2Q96F07 1278 aa4.51□□□□□ -1.69
SPG11-206ENST00000558093 FUBP3Q96I24 572 aaKnown RBP eCLIP4.51□□□□□ -1.69
SPG11-206ENST00000558093 MRI1Q9BV20 369 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms