RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PTPN14Q15678 1187 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 ARSHQ5FYA8 562 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 ANKRD54Q6NXT1 300 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 LLGL2Q6P1M3 1020 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 FAM173BQ6P4H8 233 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 SYCE2Q6PIF2 218 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 TAS1R1Q7RTX1 841 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 ADHFE1Q8IWW8 467 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 RNF168Q8IYW5 571 aaPredicted RBP9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 SUSD6Q92537 303 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 SNX21Q969T3 373 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 DRC1Q96MC2 740 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 NTPCRQ9BSD7 190 aaKnown RBP9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 TIPINQ9BVW5 301 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 S1PR5Q9H228 398 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 CXCL16Q9H2A7 254 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 EPHX3Q9H6B9 360 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 C17orf75Q9HAS0 396 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 BLOC1S4Q9NUP1 217 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 SNTG2Q9NY99 539 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 PRG3Q9Y2Y8 225 aaPredicted RBP9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 CLIC4Q9Y696 253 aa9.67□□□□□ -0.86
SNRPA1-206ENST00000558059 DOCK6Q96HP0 2047 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 NPHP3-ACAD11A0A0J9YXS1 232 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 PTGESO14684 152 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 SLC16A4O15374 487 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 RECQL4O94761 1208 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 SSTR3P32745 418 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 LONP1P36776 959 aaKnown RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 UBA7P41226 1012 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 OR1G1P47890 313 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 RAD51AP2Q09MP3 1159 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 GRIK3Q13003 919 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 DMP1Q13316 513 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 GIT2Q14161 759 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 BMS1Q14692 1282 aaKnown RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 ATF7IP2Q5U623 682 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 USP49Q70CQ1 688 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 SLC22A17Q8WUG5 538 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 SPIRE2Q8WWL2 714 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 CDK5RAP3Q96JB5 506 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 ACO2Q99798 780 aaKnown RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 CCSER1Q9C0I3 900 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 PTPRHQ9HD43 1115 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 KMT5AQ9NQR1 393 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 KCND2Q9NZV8 630 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 DAXXQ9UER7 740 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 STK39Q9UEW8 545 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 TNFSF13BQ9Y275 285 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 USP15Q9Y4E8 981 aaPredicted RBP9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 HCFC2Q9Y5Z7 792 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 MYH15Q9Y2K3 1946 aa9.66□□□□□ -0.86
SNRPA1-206ENST00000558059 PHLPP2Q6ZVD8 1323 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 VWA8A3KMH1 1905 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PI4K2BG5E9Z4 385 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 ABLIM1O14639 778 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 STX6O43752 255 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 SOD2P04179 222 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CNPP09543 421 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PLS3P13797 630 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 HOXB8P17481 243 aaPredicted RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PLCG1P19174 1290 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PROZP22891 400 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 MARCKSP29966 332 aaPredicted RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CA8P35219 290 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 KARSQ15046 597 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 NAB2Q15742 525 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 DCAF4L1Q3SXM0 396 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 ARSIQ5FYB1 569 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 KIAA0319Q5VV43 1072 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 TMEM161BQ8NDZ6 487 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 RABGGTAQ92696 567 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CASP10Q92851 521 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CALML4Q96GE6 196 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 EPSTI1Q96J88 318 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 KLHL5Q96PQ7 755 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 RPS6KC1Q96S38 1066 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PAAF1Q9BRP4 392 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 HERC2P3Q9BVR0 1158 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 TARS2Q9BW92 718 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 COLEC11Q9BWP8 271 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 APOL5Q9BWW9 433 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 MRPL4Q9BYD3 311 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 GPR62Q9BZJ7 368 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CDT1Q9H211 546 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CHST7Q9NS84 486 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 CACNG4Q9UBN1 327 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 FBXO2Q9UK22 296 aaPredicted RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 GDAQ9Y2T3 454 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 SRPRBQ9Y5M8 271 aaKnown RBP9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PLXNA3P51805 1871 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 TECTAO75443 2155 aa9.65□□□□□ -0.86
SNRPA1-206ENST00000558059 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms