RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 ACSL3O95573 720 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 DRD4P21917 467 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 CHRNA3P32297 505 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 HADHBP55084 474 aaKnown RBP13.83□□□□□ -0.2
LDLR-207ENST00000558013 PGM5Q15124 567 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 SEL1L2Q5TEA6 688 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 POMGNT1Q8WZA1 660 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 DDX1Q92499 740 aaKnown RBP13.83□□□□□ -0.2
LDLR-207ENST00000558013 RMDN3Q96TC7 470 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 MLXIPLQ9NP71 852 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
LDLR-207ENST00000558013 MIF4GDA9UHW6 222 aaKnown RBP13.82□□□□□ -0.2
LDLR-207ENST00000558013 ZNF862O60290 1169 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 LRRC14Q15048 493 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 LONRF1Q17RB8 773 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 CNPY4Q8N129 248 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 HEMGNQ9BXL5 484 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 PCYOX1Q9UHG3 505 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 WNT10BO00744 389 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 NUDT17P0C025 328 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 CHKAP35790 457 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 ACTN3Q08043 901 aaPredicted RBP13.82□□□□□ -0.2
LDLR-207ENST00000558013 MYBPC2Q14324 1141 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 TNIP1Q15025 636 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 ERMARDQ5T6L9 678 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 KRT39Q6A163 491 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 SPOPLQ6IQ16 392 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 MICALCLQ6ZW33 695 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 PRMT1Q99873 361 aaKnown RBP13.82□□□□□ -0.2
LDLR-207ENST00000558013 CTNNAL1Q9UBT7 734 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 GGT7Q9UJ14 662 aa13.82□□□□□ -0.2
LDLR-207ENST00000558013 RGS16O15492 202 aaPredicted RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 IBSPP21815 317 aaPredicted RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 RFX1P22670 979 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 MNAT1P51948 309 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 GTF2A1P52655 376 aaPredicted RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 MFAP3P55082 362 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 NCKAP1LP55160 1127 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RPS6KC1Q96S38 1066 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 FAM213AQ9BRX8 229 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RAB20Q9NX57 234 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 PGAP2Q9UHJ9 254 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RASAL2Q9UJF2 1139 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RIPK2O43353 540 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 GJB6O95452 261 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 CYP1A2P05177 515 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 ASNSP08243 561 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 ADCY1Q08828 1119 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 CCDC121Q6ZUS5 278 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 C12orf56Q8IXR9 622 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 MGARPQ8TDB4 240 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 ZNF516Q92618 1163 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 CD248Q9HCU0 757 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 ANAPC7Q9UJX3 599 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 R3HDM2Q9Y2K5 976 aaKnown RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 GOLGA6L7A0A1B0GV03 622 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 PAEPP09466 180 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 GZMAP12544 262 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 RRM1P23921 792 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 CDR2Q01850 454 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 PPP1R7Q15435 360 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 YTHDF3Q7Z739 585 aaKnown RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 PASD1Q8IV76 773 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 PSPC1Q8WXF1 523 aaKnown RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 ZNF317Q96PQ6 595 aaPredicted RBP13.81□□□□□ -0.2
LDLR-207ENST00000558013 PDCD2LQ9BRP1 358 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 WNT8AQ9H1J5 351 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 KMT5AQ9NQR1 393 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 TCEAL9Q9UHQ7 104 aa13.81□□□□□ -0.2
LDLR-207ENST00000558013 P4HA2O15460 535 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 PLA2G6O60733 806 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 PDE6CP51160 858 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 DRG2P55039 364 aaKnown RBP13.8□□□□□ -0.2
LDLR-207ENST00000558013 EIF3BP55884 814 aaKnown RBP13.8□□□□□ -0.2
LDLR-207ENST00000558013 PSMC5P62195 406 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 CYFIP1Q7L576 1253 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 CACNA2D3Q8IZS8 1091 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 FBXL13Q8NEE6 735 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 CHMP6Q96FZ7 201 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 CEP170P1Q96L14 293 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 GABBR1Q9UBS5 961 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 HNRNPDLO14979 420 aaKnown RBP13.8□□□□□ -0.2
LDLR-207ENST00000558013 MMP13P45452 471 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 RWDD2BP57060 319 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 MTMR2Q13614 643 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 AUHQ13825 339 aaKnown RBP13.8□□□□□ -0.2
LDLR-207ENST00000558013 BAATQ14032 418 aaPredicted RBP13.8□□□□□ -0.2
LDLR-207ENST00000558013 HOOK3Q86VS8 718 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 C4orf19Q8IY42 314 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 CCDC114Q96M63 670 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 NT5C1BQ96P26 610 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
LDLR-207ENST00000558013 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms