RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 PHKA2P46019 1235 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 POLGP54098 1239 aaPredicted RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 DRP2Q13474 957 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 SUZ12Q15022 739 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 PLCB4Q15147 1175 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 C1orf220Q5T0J3 134 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 LYPD4Q6UWN0 246 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 PLPPR4Q7Z2D5 763 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 DPP9Q86TI2 863 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 TMTC1Q8IUR5 882 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 SLC17A8Q8NDX2 589 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 PLEKHO2Q8TD55 490 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 ATP8B4Q8TF62 1192 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 USP6NLQ92738 828 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 KCNN1Q92952 543 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 GANQ9H2C0 597 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 PCIF1Q9H4Z3 704 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 ZCCHC17Q9NP64 241 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 ENAMQ9NRM1 1142 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 NRBP2Q9NSY0 501 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 ARHGAP28Q9P2N2 729 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 REXO2Q9Y3B8 237 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 IVNS1ABPQ9Y6Y0 642 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 EMSYQ7Z589 1322 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 IGKV6-21A0A0C4DH24 114 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 NOP56O00567 594 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 FANCGO15287 622 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 ADCY6O43306 1168 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 EXOC3O60645 756 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 MAFO75444 373 aaPredicted RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 GH1P01241 217 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 INHAP05111 366 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 EDN1P05305 212 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 TRIM49P0CI25 452 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 TRIM49CP0CI26 452 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 XRCC5P13010 732 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 SLC9A1P19634 815 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 PON1P27169 355 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 SMTNP53814 917 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 SNRPFP62306 86 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 ACVR2BQ13705 512 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 LAMC2Q13753 1193 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 TAF1CQ15572 869 aaPredicted RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 C4orf17Q53FE4 359 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 DCAF17Q5H9S7 520 aaPredicted RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 PRAMEF19Q5SWL8 479 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 PDXDC1Q6P996 788 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 TRIM65Q6PJ69 517 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 CYP26C1Q6V0L0 522 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 ACRBPQ8NEB7 543 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 AFG1LQ8WV93 481 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 GLG1Q92896 1179 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 HVCN1Q96D96 273 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 ZBTB10Q96DT7 871 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 IFT74Q96LB3 600 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 TINF2Q9BSI4 451 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 CFHR5Q9BXR6 569 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 EDEM3Q9BZQ6 932 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 RNPEPQ9H4A4 650 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 SMARCAD1Q9H4L7 1026 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 AZI2Q9H6S1 392 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 SIX2Q9NPC8 291 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 HSPBP1Q9NZL4 362 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 FLRT1Q9NZU1 646 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 CGNQ9P2M7 1197 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 AJAP1Q9UKB5 411 aaPredicted RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 GJD2Q9UKL4 321 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 USP20Q9Y2K6 914 aa8.04□□□□□ -1.12
SPG11-204ENST00000557866 R3HCC1Q9Y3T6 440 aaKnown RBP8.04□□□□□ -1.12
SPG11-204ENST00000557866 GOLGA8IPA6NC78 632 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 LRRC53A6NM62 1247 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 GOLGA8JA6NMD2 632 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 MAPK13O15264 365 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 LZTS3O60299 673 aaPredicted RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 TLR2O60603 784 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 ABL1P00519 1130 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 IGHA2P01877 340 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 LGALS2P05162 132 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 ADRB2P07550 413 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CELA2BP08218 269 aaPredicted RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 PLEKP08567 350 aaPredicted RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 HOXC6P09630 235 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 CTGFP29279 349 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CNGA1P29973 690 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 ARHGAP25P42331 645 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 NAMPTP43490 491 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 GDF10P55107 478 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 POLR2FP61218 127 aaKnown RBP8.03□□□□□ -1.12
SPG11-204ENST00000557866 DLG4P78352 724 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CDK17Q00537 523 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 PPP3CAQ08209 521 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 CAPSQ13938 189 aa8.03□□□□□ -1.12
SPG11-204ENST00000557866 TLR1Q15399 786 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms