RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 CNNM3Q8NE01 707 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 MSANTD3Q96H12 275 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 PGBD1Q96JS3 809 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 CLSTN3Q9BQT9 956 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 ZNF577Q9BSK1 485 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 APOL6Q9BWW8 343 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 TMEM9BQ9NQ34 198 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 AGPAT5Q9NUQ2 364 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 C2orf42Q9NWW7 574 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 ADAM28Q9UKQ2 775 aa10.56□□□□□ -0.72
PABPN1-208ENST00000557702 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 LNP1A1A4G5 178 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 TADA2AO75478 443 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 AKAP3O75969 853 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 CAPNS1P04632 268 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 HOXC13P31276 330 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 RDXP35241 583 aaKnown RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 PDE1AP54750 535 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 CREB5Q02930 508 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 SLC5A9Q2M3M2 681 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 FAM78AQ5JUQ0 283 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 RTP2Q5QGT7 225 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 POTEHQ6S545 545 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 CWC27Q6UX04 472 aaKnown RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 RHPN2Q8IUC4 686 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 SRBD1Q8N5C6 995 aaKnown RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 DEFB124Q8NES8 71 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 DEPDC1BQ8WUY9 529 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 GAD1Q99259 594 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 TTPALQ9BTX7 342 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 ANO3Q9BYT9 981 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 SLC32A1Q9H598 525 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 C8orf33Q9H7E9 229 aaPredicted RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 AVENQ9NQS1 362 aaPredicted RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 SUCLA2Q9P2R7 463 aaPredicted RBP10.55□□□□□ -0.72
PABPN1-208ENST00000557702 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 ITPR1Q14643 2758 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 SF3B1O75533 1304 aaKnown RBP eCLIP10.55□□□□□ -0.724e-7■■■■■ 86.2
PABPN1-208ENST00000557702 CACNA1EQ15878 2313 aa10.55□□□□□ -0.72
PABPN1-208ENST00000557702 hCG_1642624A0A1W2PR95 340 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 FAM221BA6H8Z2 402 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 FAM86B1E9PN63 330 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 ZNF862O60290 1169 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 RHOBTB1O94844 696 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PLEKHA8P1O95397 391 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 FAM86B2P0C5J1 330 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 CEBPBP17676 345 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 HOXA11P31270 313 aaPredicted RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 SREBF1P36956 1147 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 MLH1P40692 756 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PXNP49023 591 aaPredicted RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 SCNN1GP51170 649 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 KPNA1P52294 538 aaPredicted RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PRKCEQ02156 737 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 ELF2Q15723 593 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PSMD5Q16401 504 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PLK5Q496M5 336 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 UBXN11Q5T124 520 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 HEATR3Q7Z4Q2 680 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 CEP57Q86XR8 500 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 TEX2Q8IWB9 1127 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 SYNPOQ8N3V7 929 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 SMG8Q8ND04 991 aaKnown RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 LNX1Q8TBB1 728 aaPredicted RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 CSGALNACT1Q8TDX6 532 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 HNRNPLLQ8WVV9 542 aaKnown RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 PIK3R5Q8WYR1 880 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 LRIG1Q96JA1 1093 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 ASB16Q96NS5 453 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 IGSF5Q9NSI5 407 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 MIOSQ9NXC5 875 aa10.54□□□□□ -0.72
PABPN1-208ENST00000557702 ASCC3Q8N3C0 2202 aaKnown RBP10.54□□□□□ -0.72
PABPN1-208ENST00000557702 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 BCLAF3A2AJT9 711 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 H0Y626 953 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 CDX4O14627 284 aaPredicted RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 ZNF197O14709 1029 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 KHNYNO15037 678 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 DDAH1O94760 285 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 TRIM16O95361 564 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 PTPN2P17706 415 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 RAB33AQ14088 237 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 TARBP2Q15633 366 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 UAP1L1Q3KQV9 507 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 ANKRD45Q5TZF3 282 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 PDXDC1Q6P996 788 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 VITQ6UXI7 678 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 CMTR1Q8N1G2 835 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 FAM200AQ8TCP9 573 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 ZFP42Q96MM3 310 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 DUSP15Q9H1R2 295 aaPredicted RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 IPPQ9Y573 584 aa10.53□□□□□ -0.72
PABPN1-208ENST00000557702 URB1O60287 2271 aaKnown RBP10.53□□□□□ -0.72
PABPN1-208ENST00000557702 IGLV3-22A0A075B6J6 115 aa10.52□□□□□ -0.73
PABPN1-208ENST00000557702 IGKV6-21A0A0C4DH24 114 aa10.52□□□□□ -0.73
PABPN1-208ENST00000557702 WDR64B1ANS9 1081 aa10.52□□□□□ -0.73
PABPN1-208ENST00000557702 ADAM12O43184 909 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms