RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ADAMTS3O15072 1205 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PRAMEF4O60810 478 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 FGF18O76093 207 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ENDOD1O94919 500 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 IL18RAPO95256 599 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 AGR2O95994 175 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PARP1P09874 1014 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RAC2P15153 192 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 NPR1P16066 1061 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RPL17P18621 184 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CTSSP25774 331 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 GDNFP39905 211 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 MAPK9P45984 424 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SLC6A9P48067 706 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ANTXR2P58335 489 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ERVFRD-1P60508 538 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 NKX3-2P78367 333 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CD83Q01151 205 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 FMO1Q01740 532 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CD69Q07108 199 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 DAG1Q14118 895 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 NR1I3Q14994 352 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PUM3Q15397 648 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 STILQ15468 1287 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 DGKDQ16760 1214 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ADGRF1Q5T601 910 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 GGT6Q6P531 493 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SLC23A3Q6PIS1 610 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 LVRNQ6Q4G3 990 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 FAM180AQ6UWF9 173 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ABHD15Q6UXT9 468 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CD300LDQ6UXZ3 194 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RSPH3Q86UC2 560 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SESTD1Q86VW0 696 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SYTL1Q8IYJ3 562 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CLASRPQ8N2M8 674 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RNF152Q8N8N0 203 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 DTX3Q8N9I9 347 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ZNF527Q8NB42 609 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CCHCR1Q8TD31 782 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 MYLIPQ8WY64 445 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ALG3Q92685 438 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ARL8AQ96BM9 186 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 TMEM41AQ96HV5 264 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PAWRQ96IZ0 340 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 TMX3Q96JJ7 454 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 MRGPRX4Q96LA9 322 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CDC5LQ99459 802 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SLC38A3Q99624 504 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 EIF2AK1Q9BQI3 630 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PDCD2LQ9BRP1 358 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 TACO1Q9BSH4 297 aaKnown RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ISCA1Q9BUE6 129 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 TTLL2Q9BWV7 592 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RNF32Q9H0A6 362 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ZHX3Q9H4I2 956 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 POLR3BQ9NW08 1133 aaPredicted RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RRN3Q9NYV6 651 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 ARHGAP20Q9P2F6 1191 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 CPNE7Q9UBL6 633 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 FEZ2Q9UHY8 353 aaPredicted RBP3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PCDHA6Q9UN73 950 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 PLA2G2DQ9UNK4 145 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SIK3Q9Y2K2 1263 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 SLC4A7Q9Y6M7 1214 aa3.78□□□□□ -1.8
TRAV28-201ENST00000557548 RPTORQ8N122 1335 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 A0A1W2PR48 441 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ISM1B1AKI9 464 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 M0R3H8 397 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 N4BP3O15049 544 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 PAPLNO95428 1278 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 LY86O95711 162 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 IL18BPO95998 194 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 CSTBP04080 98 aaKnown RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MPOP05164 745 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 LTA4HP09960 611 aaKnown RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MALP21145 153 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ECHS1P30084 290 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ADCY8P40145 1251 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 HSPA7P48741 367 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MAPKAPK2P49137 400 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 SUMO3P55854 103 aaPredicted RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MEF2AQ02078 507 aaPredicted RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MAP3K12Q12852 859 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 SNAPC2Q13487 334 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 SIM2Q14190 667 aaPredicted RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MPEG1Q2M385 716 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 SLC35G1Q2M3R5 365 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 MST1LQ2TV78 715 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 PRR16Q569H4 304 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 JAKMIP3Q5VZ66 844 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ZC3H14Q6PJT7 736 aaKnown RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 GADL1Q6ZQY3 521 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 Q6ZVL8 140 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 PCGF5Q86SE9 256 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ZC3H18Q86VM9 953 aaKnown RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 ZGPATQ8N5A5 531 aaKnown RBP3.77□□□□□ -1.81
TRAV28-201ENST00000557548 FLCNQ8NFG4 579 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 OR10H5Q8NGA6 315 aa3.77□□□□□ -1.81
TRAV28-201ENST00000557548 PPP1R14CQ8TAE6 165 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms