RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SPECC1Q5M775 1068 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 CREB3L3Q68CJ9 461 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 TWF2Q6IBS0 349 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 MRPL14Q6P1L8 145 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 GLB1LQ6UWU2 654 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 SYNE3Q6ZMZ3 975 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 C15orf39Q6ZRI6 1047 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 ZNF280BQ86YH2 543 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 ZNF713Q8N859 430 aaPredicted RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 LENG9Q96B70 501 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 KLHL5Q96PQ7 755 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 BACH2Q9BYV9 841 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 LSG1Q9H089 658 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 GLT8D2Q9H1C3 349 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 SEMA4AQ9H3S1 761 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 TBC1D17Q9HA65 648 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 CHST12Q9NRB3 414 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 RBM28Q9NW13 759 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 IGSF9Q9P2J2 1179 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 WNT16Q9UBV4 365 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 CA14Q9ULX7 337 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 PIN4Q9Y237 131 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 MYH9P35579 1960 aaKnown RBP6.58□□□□□ -1.36
VPS33B-207ENST00000557470 C2orf16Q68DN1 1984 aa6.58□□□□□ -1.36
VPS33B-207ENST00000557470 CLUHO75153 1309 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 A0A087WZ62 844 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 TMEM150BA6NC51 233 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GOLGA8AA7E2F4 631 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GOLGA8BA8MQT2 603 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 WDR64B1ANS9 1081 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 CHMP2AO43633 222 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 OFD1O75665 1012 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 DDHD2O94830 711 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 DCNP07585 359 aaKnown RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 MYBP10242 640 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 SFPQP23246 707 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 CDC27P30260 824 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GBP2P32456 591 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 AFF1P51825 1210 aaKnown RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 NR5A1Q13285 461 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 PUM1Q14671 1186 aaKnown RBP eCLIP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 TARBP2Q15633 366 aaKnown RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 SDE2Q6IQ49 451 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 REXO1Q8N1G1 1221 aaKnown RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 SLC44A3Q8N4M1 653 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 DCLK2Q8N568 766 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 FAM200AQ8TCP9 573 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GPR152Q8TDT2 470 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 EPS8L1Q8TE68 723 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 RSPH1Q8WYR4 309 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GJA10Q969M2 543 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 TCEANC2Q96MN5 208 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 MYADMQ96S97 322 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 CEP89Q96ST8 783 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 SH2D3AQ9BRG2 576 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 FDXACB1Q9BRP7 624 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 EMILIN2Q9BXX0 1053 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 GCOM2Q9BZD3 368 aaPredicted RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 WDR6Q9NNW5 1121 aaKnown RBP6.57□□□□□ -1.36
VPS33B-207ENST00000557470 MAN1C1Q9NR34 630 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 DISC1Q9NRI5 854 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 NRBP2Q9NSY0 501 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 FAM105AQ9NUU6 356 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 DLGAP2Q9P1A6 1054 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 EPS15L1Q9UBC2 864 aa6.57□□□□□ -1.36
VPS33B-207ENST00000557470 CHD8Q9HCK8 2581 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 hCG_2014768A0A024R1R8 64 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 IGKV6-21A0A0C4DH24 114 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 CCDC195A0A1B0GUA6 201 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ESYT2A0FGR8 921 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 C2CD2LO14523 706 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 MSH4O15457 936 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 TEX28O15482 410 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZBTB43O43298 467 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZNF623O75123 536 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 RFPL2O75678 378 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 KRT37O76014 449 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 SP9P0CG40 484 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 SRFP11831 508 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 SKIP12755 728 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ATP2B1P20020 1258 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 FSHRP23945 695 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 MAPK1P28482 360 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 CIITAP33076 1130 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 RAB27AP51159 221 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 AK2P54819 239 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 EXOSC10Q01780 885 aaKnown RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 NECTIN1Q15223 517 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 NONOQ15233 471 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 PFKFB3Q16875 520 aaPredicted RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 MTERF2Q49AM1 385 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ZC3H14Q6PJT7 736 aaKnown RBP6.56□□□□□ -1.36
VPS33B-207ENST00000557470 AGMOQ6ZNB7 445 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 TAS1R1Q7RTX1 841 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 C1orf210Q8IVY1 113 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 EXOC8Q8IYI6 725 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 SUMF1Q8NBK3 374 aa6.56□□□□□ -1.36
VPS33B-207ENST00000557470 ST13P5Q8NFI4 369 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms