RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 OATP04181 439 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 GOLGA6DP0CG33 693 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 MYBL1P10243 752 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 CAPN2P17655 700 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 ABCB4P21439 1286 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 ARL2P36404 184 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 LIG4P49917 911 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 DNA2P51530 1060 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 AP3M2P53677 418 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 PTENP60484 403 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SKOR1P84550 965 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 FMO1Q01740 532 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 POU5F1Q01860 360 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 MAP2K1Q02750 393 aaPredicted RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 NEDD9Q14511 834 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 PWP2Q15269 919 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 FAM160B1Q5W0V3 765 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 ACAD10Q6JQN1 1059 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SV2AQ7L0J3 742 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 NOP9Q86U38 636 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SLC20A1Q8WUM9 679 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 PSPC1Q8WXF1 523 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SEMA4DQ92854 862 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SAAL1Q96ER3 474 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 FAM167AQ96KS9 214 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZSWIM1Q9BR11 485 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 FAM129AQ9BZQ8 928 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 GOLGA6AQ9NYA3 693 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 TAS2R14Q9NYV8 317 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 UTP11Q9Y3A2 253 aaKnown RBP9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 SNCAIPQ9Y6H5 919 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 LRRC37A2A6NM11 1700 aa9.62□□□□□ -0.87
PPP4R3A-212ENST00000557382 ADGRA3Q8IWK6 1321 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 OTOFQ9HC10 1997 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 IRF6O14896 467 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 CYP26A1O43174 497 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 GAS2O43903 313 aaKnown RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 PHACTR2O75167 634 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 SLC25A27O95847 323 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 FGGP02679 453 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 CYP11B1P15538 503 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ALDH5A1P51649 535 aaPredicted RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 POLGP54098 1239 aaPredicted RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 GYS2P54840 703 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ERVK-9P63128 1117 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 GRM1Q13255 1194 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 TARBP2Q15633 366 aaKnown RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZSCAN26Q16670 478 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZACNQ401N2 412 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 WDR44Q5JSH3 913 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 TRIM72Q6ZMU5 477 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 TAS1R3Q7RTX0 852 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 PALB2Q86YC2 1186 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ANKRD35Q8N283 1001 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZSWIM2Q8NEG5 633 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 DEPTORQ8TB45 409 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 IFT81Q8WYA0 676 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 DDX1Q92499 740 aaKnown RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 CD101Q93033 1021 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 BICD1Q96G01 975 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 GDAP1L1Q96MZ0 367 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 CEP89Q96ST8 783 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 PCDHB18PQ96TA0 734 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 SH2D3AQ9BRG2 576 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 PLVAPQ9BX97 442 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 GOLPH3Q9H4A6 298 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 AVENQ9NQS1 362 aaPredicted RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 C1orf112Q9NSG2 853 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 RASAL2Q9UJF2 1139 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ZHX1Q9UKY1 873 aaPredicted RBP9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 COG5Q9UP83 839 aa9.61□□□□□ -0.87
PPP4R3A-212ENST00000557382 ERICH4A6NGS2 130 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 SRRM3A6NNA2 597 aaPredicted RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 HMGB1P1B2RPK0 211 aaPredicted RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 PODXLO00592 558 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 CXCL11O14625 94 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 ERLIN2O94905 339 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 C4BPAP04003 597 aaKnown RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 FAM153BP0C7A2 387 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 ATP4AP20648 1035 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 TBXAS1P24557 533 aaPredicted RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 ECHS1P30084 290 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 CHRNA3P32297 505 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 CTNNA1P35221 906 aaKnown RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 USP8P40818 1118 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 PEX5P50542 639 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 EFNA5P52803 228 aa9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 HIRAP54198 1017 aaPredicted RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 RNASE9P60153 205 aaKnown RBP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 HLTFQ14527 1009 aaKnown RBP eCLIP9.6□□□□□ -0.87
PPP4R3A-212ENST00000557382 CYP1B1Q16678 543 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms